| Protein: | zag-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 596 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for zag-1.
| Description | E-value | Query Range |
Subject Range |
|
|
786.0 | [0..3] | [594..326] |
|
Region A: Residues: [1-128] |
1 11 21 31 41 51
| | | | | |
1 MVDIAEAMPT TASSLPSDEA LRKFKCPECT KAFKFKHHLK EHIRIHSGEK PFECQQCHKR 60
61 FSHSGSYSSH MSSKKCVQQA SPSMVTPFNP YQLMMYRNIM LQLQTPQVSF LPSTAANNMD 120
121 YMSLLQAN
|
| Detection Method: |  |
| Confidence: | 4.045757 |
| Match: | 2dlkA |
| Description: | No description for 2dlkA was found. |
| Term | Confidence | Notes |
| transcription regulator activity | 3.14649486810497 | bayes_pls_golite062009 |
| DNA binding | 2.89992872665011 | bayes_pls_golite062009 |
| nucleic acid binding | 2.66588130528088 | bayes_pls_golite062009 |
| transcription factor activity | 1.97913234583912 | bayes_pls_golite062009 |
| binding | 1.7678140110688 | bayes_pls_golite062009 |
| transcription repressor activity | 1.56441586442357 | bayes_pls_golite062009 |
| protein binding | 1.33682539095771 | bayes_pls_golite062009 |
| catalytic activity | 0.616333600617445 | bayes_pls_golite062009 |
| transcription activator activity | 0.35578487491271 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.29294316958168 | bayes_pls_golite062009 |
|
Region A: Residues: [129-196] |
1 11 21 31 41 51
| | | | | |
1 LFQSLENGTS PTPTQEPSAP ASPEPKIEVV DEPEVSSEVK TEVKTEVKTE DSVPEESITP 60
61 AVSMSLSP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [197-349] |
1 11 21 31 41 51
| | | | | |
1 APEQNGNESM NNGGSGSDGK SSPDWRPLRS RSFLNDSQVA VLQNHFKRNP FPSKYELSAV 60
61 AEQIGVNKRV VQVWFQNTRA KERRSNRLPS MPRGSVASAA AAAATSPTVW QTPVQLMAAW 120
121 ASQFSNGNNS LTASQDERNN ENTDEVMDHD GLK
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 1tf6A |
| Description: | Transcription factor IIIA, TFIIIA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.14649486810497 | bayes_pls_golite062009 |
| DNA binding | 2.89992872665011 | bayes_pls_golite062009 |
| nucleic acid binding | 2.66588130528088 | bayes_pls_golite062009 |
| transcription factor activity | 1.97913234583912 | bayes_pls_golite062009 |
| binding | 1.7678140110688 | bayes_pls_golite062009 |
| transcription repressor activity | 1.56441586442357 | bayes_pls_golite062009 |
| protein binding | 1.33682539095771 | bayes_pls_golite062009 |
| catalytic activity | 0.616333600617445 | bayes_pls_golite062009 |
| transcription activator activity | 0.35578487491271 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.29294316958168 | bayes_pls_golite062009 |
|
Region A: Residues: [350-430] |
1 11 21 31 41 51
| | | | | |
1 DGKETPLDLT LSTDDTEPEW SPEKLIGFLD QTGGVIQELL RQAGNGFVTN QEDEEEKPIK 60
61 AEESPVSSGS SSIWPSFIGQ Y
|
| Detection Method: | |
| Confidence: | 0.983 |
| Match: | 1neqA |
| Description: | SOLUTION STRUCTURE OF THE MU NER PROTEIN BY MULTIDIMENSIONAL NMR |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA binding | 3.50333148278009 | bayes_pls_golite062009 |
| transcription regulator activity | 3.22435490927648 | bayes_pls_golite062009 |
| nucleic acid binding | 3.13941403740118 | bayes_pls_golite062009 |
| binding | 2.1596228032617 | bayes_pls_golite062009 |
| transcription factor activity | 2.10376028888832 | bayes_pls_golite062009 |
| transcription repressor activity | 1.47303242361831 | bayes_pls_golite062009 |
| protein binding | 0.835527357717776 | bayes_pls_golite062009 |
| catalytic activity | 0.416161499675821 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.0407275201491086 | bayes_pls_golite062009 |
|
Region A: Residues: [431-596] |
1 11 21 31 41 51
| | | | | |
1 PSILDSASLS VLEKALDQQK SSEDDASSLC SNESKLLKFP TTPLKEEEGL FSCDQCDKVF 60
61 GKQSSLARHK YEHSGQRPYK CDICEKAFKH KHHLTEHKRL HSGEKPFQCD KCLKRFSHSG 120
121 SYSQHMNHRY SYCKPYREQP ASPSDVLNGG SVTVSPSSSN TPPPST
|
| Detection Method: | |
| Confidence: | 57.154902 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
