| Protein: | lin-40 |
| Organism: | Caenorhabditis elegans |
| Length: | 756 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
|
Region A: Residues: [1-168] |
1 11 21 31 41 51
| | | | | |
1 MSSSSLSSTS TRVTYAVGDF VYFDDTSATD APYQIRKIEE LVKTEKGGVD ARCVVYLRRR 60
61 DIPQHLLKIA DQAQRRFDNY YEVDKKKPEN FTTKGFIVVN GASEAAPEAA PEATEASAET 120
121 SETKVKEDTD DVAEKMEEDE ECPAPVGQGR TSSTEEPSAS DAPAATAK
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [169-275] |
1 11 21 31 41 51
| | | | | |
1 DKKEEKEAKE NAKNLKETAE AEATKLIDWG DGGLPLGVDK LTPDQRLKLR QHEIFMTRQS 60
61 EILPAAAIRG KCRVVLLGDG EEAQNYLPLD DTFYHSLVYD PNAQTLL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [276-410] |
1 11 21 31 41 51
| | | | | |
1 ADKGAIRVGE KYQAVVDEWM EPADREAKEA KVLAEKVKKE EEEAKLKAEA EEDTENDGLT 60
61 IAEDEEMPEL KNEEKEETKV EEEATTTDSE GEVGEVLVWH PHHALTDRDI DQYMIVARSV 120
121 GLFARAIDGA SAPKL
|
| Detection Method: | |
| Confidence: | 11.49485 |
| Match: | PF01448.15 |
| Description: | No description for PF01448.15 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [411-464] |
1 11 21 31 41 51
| | | | | |
1 PTLQLAAAFA SRDVTIFHAH AILHQANYDV GQAVKYLVPV ASRDTYPCQV DDSS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [465-546] |
1 11 21 31 41 51
| | | | | |
1 GLQTKTLGGP ILCRDQLEEW STPEMNLFED ALDKVGKDFN EIRAEYLPWK SIRDIVEYYY 60
61 LMKASNRYTD RKKNKPSAGG GS
|
| Detection Method: | |
| Confidence: | 15.0 |
| Match: | 2crgA |
| Description: | Solution structure of the myb-like DNA-binding domain of mouse MTA3 protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [547-651] |
1 11 21 31 41 51
| | | | | |
1 STTTDEKFTN IYIPPFNKPI AASILPYNTS QTTLMNNDNP CENCGTLDAL NWYQWGGVGD 60
61 KKVLCSTCWI QWKKFAGLNQ KHELERFDKT RPPPVEPVAP TPAAS
|
| Detection Method: | |
| Confidence: | 6.522879 |
| Match: | 4gatA |
| Description: | Erythroid transcription factor GATA-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.270879137859077 | bayes_pls_golite062009 |
|
Region A: Residues: [652-756] |
1 11 21 31 41 51
| | | | | |
1 NGTPASQKAA ATAAVNTLTP QQQQQQRAAA ANMLMTLNSG DKQNLLNVAK EALARGQITQ 60
61 EQFLQLQKNF AQKIQAQIQQ QIQQQQQRQA QTTPQVVATP RVRIG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
