| Protein: | abts-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 797 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for abts-3.
| Description | E-value | Query Range |
Subject Range |
|
|
582.0 | [0..4] | [794..130] |
|
Region A: Residues: [1-254] |
1 11 21 31 41 51
| | | | | |
1 MGSEPESCID DTRYMTDDDD VIDEYDNVTL MYAKHEKIPM KDFGSEIRAT MDIDHLLNKA 60
61 VLLLDLQETS LEEIFAKIIH EMDIQEPEFT SEQVRSVLFT QDAGNQFHIL SRTVQSICTT 120
121 GSVGGSFDYD QTWICALCML NTVQHRHVAI ARLSHPTNLG RTMQDLRFII IVIAPSRAKG 180
181 TKTALETTRT FATLFADMEI RQRLVMAQSV EQFRSTLLSA AKELAMDQNQ WRERKSSIHL 240
241 SHAKEQIFGP EAWY
|
| Detection Method: |  |
| Confidence: | 39.045757 |
| Match: | 1hynP |
| Description: | Erythrocite membrane Band 3 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| anion transmembrane transporter activity | 5.53342374278862 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 5.52089460336827 | bayes_pls_golite062009 |
| inorganic anion transmembrane transporter activity | 5.05984221151516 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 4.53671418417138 | bayes_pls_golite062009 |
| transporter activity | 3.71632554122909 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.65156575316092 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.6328272808612 | bayes_pls_golite062009 |
| bicarbonate transmembrane transporter activity | 3.47798360646642 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 3.1367361209641 | bayes_pls_golite062009 |
| chloride transmembrane transporter activity | 2.81610322933515 | bayes_pls_golite062009 |
| anion exchanger activity | 2.81610322933515 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 2.69943173291914 | bayes_pls_golite062009 |
| sodium:bicarbonate symporter activity | 2.55643394918259 | bayes_pls_golite062009 |
| anion:anion antiporter activity | 2.28054946403665 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.47800480453948 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.36491414637832 | bayes_pls_golite062009 |
| antiporter activity | 1.16370853401172 | bayes_pls_golite062009 |
| binding | 1.10848568469131 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.09947631198737 | bayes_pls_golite062009 |
| transferase activity | 0.418487829092593 | bayes_pls_golite062009 |
| protein binding | 0.324874109063796 | bayes_pls_golite062009 |
| catalytic activity | 0.177485282483917 | bayes_pls_golite062009 |
| carbohydrate transmembrane transporter activity | 0.0141334718769964 | bayes_pls_golite062009 |
|
Region A: Residues: [255-398] |
1 11 21 31 41 51
| | | | | |
1 PFRGLVEEFK RRLAIYPSDY LDGIRGHKTV QKLFSTVVFL YFACLLPAIA FGVLNDDNTK 60
61 GAINVRKVII AQAIGGIFFS LFGGQPMIIL LTTVPLAIYI KVIFKISQEL GYDFLAMYAC 120
121 VGLFCQMFLI LYSATELCSL MKFA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [399-473] |
1 11 21 31 41 51
| | | | | |
1 TRSAEEMFSL FIAIAFTVES IRAIHNSFKK NYNDCDTSAI SMKAARTALN AFKNGSNADS 60
61 IVGNITSSMS IGDTG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [474-686] |
1 11 21 31 41 51
| | | | | |
1 SLCRRDTSIL YMLLMFGTLW LGLFLYNFRK TPYLTRSRRE WLADYALPAS VLIMSFTGSY 60
61 AFSDIEKDRF NLRFEFPLIQ MADVTSLPPS GYFVCLLLGF SLSFLFFIDQ NITSAIVNNN 120
121 QNKLKKGTSH NLDLFVVALL NMFLSVFGLP WMHGALPHSP LHLRALADVE ERVSQGHVHE 180
181 VIMNVRETRL ASLIAHVMIL VSMFFLIPYP LQL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [687-797] |
1 11 21 31 41 51
| | | | | |
1 IPTSVLHGLF LYMALTSLSG NEMFERLLLL ITEQQAYPPT HYIRKVPQRK VHLFTACQLL 60
61 QLIILCAFGF SPYPFIEMVF PIVCFFFLPI RHTLIPRLID YKYLDALDGR H
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
