| Protein: | ife-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 212 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ife-1.
| Description | E-value | Query Range |
Subject Range |
|
|
269.0 | [0..2] | [199..72] |
|
Region A: Residues: [1-212] |
1 11 21 31 41 51
| | | | | |
1 MTETEQTTAP IYPLKRNWTW WYLNDERNKS WEDRLKKVYT FNTVSEFWAL YDAIRPPSGL 60
61 NALCDYNVFR DDIQPMWEVP ENSNGGRWLI VIDKGKTPEM VDAIWLEILM ALVGEQFGKD 120
121 MESICGLVCN VRGKGSKISV WTKDCNDDET NMRIGVVLKE KLMAASKDHS KPLFDVIRYE 180
181 DHESCQKKTS SVVKAKLSLH SSDAPVAEKS AV
|
| Detection Method: |  |
| Confidence: | 69.221849 |
| Match: | 1ej1A |
| Description: | Translation initiation factor eIF4e |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| translation initiation factor activity | 12.6022960879923 | bayes_pls_golite062009 |
| RNA cap binding | 8.70938037002519 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 7.91586572659635 | bayes_pls_golite062009 |
| translation regulator activity | 7.87578736455963 | bayes_pls_golite062009 |
| RNA binding | 4.73187299490341 | bayes_pls_golite062009 |
| nucleic acid binding | 3.46353214508261 | bayes_pls_golite062009 |
| binding | 2.88787215275737 | bayes_pls_golite062009 |
| protein binding | 0.873044754151905 | bayes_pls_golite062009 |
| RNA 7-methylguanosine cap binding | 0.544036568660606 | bayes_pls_golite062009 |
