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View Structure Prediction Details

Protein: exos-7
Organism: Caenorhabditis elegans
Length: 312 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for exos-7.

Description E-value Query
Range
Subject
Range
gi|69930207, gi|... - gi|92115668|ref|YP_575397.1| polynucleotide phosphorylase/polyadenylase [Nitrobacter hamburgensis X1...
306.0 [0..1] [307..322]

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Predicted Domain #1
Region A:
Residues: [1-312]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVHLSDDEK LFLITGAEAN IRNDGRSCQD FRQIILERGV LSGTNGSCRV QLGQTTDVLA  60
   61 GIKLELESYD AETEKEPKQP INFNVDFSAN ASSQFAGKGG DEYAEELSAA FQAAYSKALD 120
  121 IMPNLAKTQL ADGYRWKINV DISVLQWDGS VSDAISIAII GALSDLEFPE GDVAPDDGGK 180
  181 VRIVLKRPKV AGNVRDENVQ VAMWKLDVMR CPLLLTISKI GTANLVDCTP EEECCIRSQL 240
  241 LVGLAAIADS SENNEPNYDV TCVKQVGGGL LEMESIQEML ELAAKSVGGL YGALAKRLKN 300
  301 EEMRKPGHSF LL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.0
Match: 2nn6E
Description: No description for 2nn6E was found.

Predicted functions:

Term Confidence Notes
exoribonuclease activity 7.55877202113513 bayes_pls_golite062009
ribonuclease activity 7.54644729272203 bayes_pls_golite062009
exoribonuclease activity, producing 5'-phosphomonoesters 7.5310318714913 bayes_pls_golite062009
3'-5'-exoribonuclease activity 6.46930372693262 bayes_pls_golite062009
3'-5' exonuclease activity 4.29895100594643 bayes_pls_golite062009
exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 3.83939403332553 bayes_pls_golite062009
exonuclease activity 3.40686901061667 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 2.86434572018929 bayes_pls_golite062009
RNA binding 2.05527376734941 bayes_pls_golite062009
hydrolase activity 1.55476709794855 bayes_pls_golite062009
binding 1.3018457178158 bayes_pls_golite062009
structural constituent of ribosome 1.2826764117718 bayes_pls_golite062009
transcription regulator activity 1.20748032530392 bayes_pls_golite062009
mRNA binding 1.17402119891853 bayes_pls_golite062009
nucleic acid binding 1.05662964529454 bayes_pls_golite062009
structural molecule activity 0.9404621246304 bayes_pls_golite062009
catalytic activity 0.878454819018611 bayes_pls_golite062009
DNA binding 0.828609700556836 bayes_pls_golite062009
nuclease activity 0.69721312877891 bayes_pls_golite062009
ATP-dependent peptidase activity 0.1173709890655 bayes_pls_golite062009
protein binding 0.0913090112555771 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle