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View Structure Prediction Details

Protein: tbc-7
Organism: Caenorhabditis elegans
Length: 639 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tbc-7.

Description E-value Query
Range
Subject
Range
tbc-7 - status:Partially_confirmed UniProt:Q18344 protein_id:AAA83335.3
314.0 [0..1] [639..1]

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Predicted Domain #1
Region A:
Residues: [1-115]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFQAGADMSD TSGDEDETVP ARVGQAAGRT DDSEVDNDEG NNFFRFQRAA PVYPKNMINH  60
   61 NLDGAATTGM RRTTSSIARI SMAIRRSLRL PRRAETRMAA REEQVLVEPI PEGPL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [116-458]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FTENTRDTRI GESSVPNLLQ EIVDNKRLNR YEKVKKIIRR TDWPVCHEIR ANLWKELCNT  60
   61 KDWSGSKRLY SDEAIEYDRI NQGKKQSPQI LADEGGVLSN FDLKEVGSVK LIRLLLIIER 120
  121 LRPEIVYAPS IYPLCSLLLH FNDDDGDCFA CINYLLNTKG YLMTAPVQWA ASSHTILALV 180
  181 KKHKSAAYVL LKRRLGTTDD SVLVKCIEDW LLWLFQYLPL PYICRIVDCY FAEGHKFLIR 240
  241 SAISIVYIWS KVHKRGMEDF RGKSLQEKID SIKKEFQDVA TNISVSTSTF IATAVKIRNL 300
  301 QSATIAKLQA QFEDELRDEV TSRPRQIKKV RRTIFCEAFK SCL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.0
Match: 2g77A
Description: No description for 2g77A was found.

Predicted Domain #3
Region A:
Residues: [459-562]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VDNDSAVELM SYMPPRLQLV TPTLAYQLSQ DGTSFYNFWS KVDPLDQTII IIKSTCGAIF  60
   61 GAYCSSTWSE RHDRKERTRS KYWGTGESYV FRMNKEMELP EIYT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [563-639]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WVGNSPDVSS DKCPQYFMSA TDKSFVIGSG GRDAIRIDEE LTHGITGPSS TFNSPQLCED  60
   61 GAFDIYELEV FHVTSSD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle