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Protein Overview: tbc-7

General Information:
Name(s) found: tbc-7 / CE29687 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00016292 locus:tbc-7 status:Partially_confirmed UniProt:H2KZ54 protein_id:CCD66328.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 696 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: regulation of Rab GTPase activity [IEALink to PubMed article]
    Molecular Function: Rab GTPase activator activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFQAGADMSD TSGDEDETVP ARVGQAAGRT DDSEVDNDEG NNFFRFQRAA PVYPKNMINH  60
   61 NLDGAATTGM RRTTSSIARI SMAIRRSLRL PRRAETRMAA REEQVLVEPI ASVVLFPLLK 120
  121 RERAQFVNRW NKGFTFWSIE LHQNFAVEVA GFTRASVFVM TENAGSSPEG PLFTENTRDT 180
  181 RIGESSVPNL LQEIVDNKRL NRYEKVKKII RRTDWPVCHE IRANLWKELC NTKDWSGSKR 240
  241 LYSDEAIEYD RINQGKKQSP QILADEGGVL SNFDLKEVGS VKLIRLLLII ERLRPEIVYA 300
  301 PSIYPLCSLL LHFNDDDGDC FACINYLLNT KGYLMTAPVQ WAASSHTILA LVKKHKSAAY 360
  361 VLLKRRLGTT DDSVLVKCIE DWLLWLFQYL PLPYICRIVD CYFAEGHKFL IRSAISIVYI 420
  421 WSKVHKRGME DFRGKSLQEK IDSIKKEFQD VATNISVSTS TFIATAVKIR NLQSATIAKL 480
  481 QAQFEDELRD EVTSRPRQIK KVRRTIFCEA FKSCLVDNDS AVELMSYMPP RLQLVTPTLA 540
  541 YQLSQDGTSF YNFWSKVDPL DQTIIIIKST CGAIFGAYCS STWSERHDRK ERTRSKYWGT 600
  601 GESYVFRMNK EMELPEIYTW VGNSPDVSSD KCPQYFMSAT DKSFVIGSGG RDAIRIDEEL 660
  661 THGITGPSST FNSPQLCEDG AFDIYELEVF HVTSSD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..172] MSA 7.440997 View MSA. No confident structure predictions are available.
    2 View Details [173..508] PSI-BLAST 28.69897 No description for 2qq8A was found.
    3 View Details [509..696] MSA 52.301997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle