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Protein Overview: tbc-7

General Information:
Name(s) found: tbc-7 / CE30886 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00016292 locus:tbc-7 status:Partially_confirmed UniProt:Q8MQB0 protein_id:CCD66329.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 639 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: regulation of Rab GTPase activity [IEALink to PubMed article]
    Molecular Function: Rab GTPase activator activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFQAGADMSD TSGDEDETVP ARVGQAAGRT DDSEVDNDEG NNFFRFQRAA PVYPKNMINH  60
   61 NLDGAATTGM RRTTSSIARI SMAIRRSLRL PRRAETRMAA REEQVLVEPI PEGPLFTENT 120
  121 RDTRIGESSV PNLLQEIVDN KRLNRYEKVK KIIRRTDWPV CHEIRANLWK ELCNTKDWSG 180
  181 SKRLYSDEAI EYDRINQGKK QSPQILADEG GVLSNFDLKE VGSVKLIRLL LIIERLRPEI 240
  241 VYAPSIYPLC SLLLHFNDDD GDCFACINYL LNTKGYLMTA PVQWAASSHT ILALVKKHKS 300
  301 AAYVLLKRRL GTTDDSVLVK CIEDWLLWLF QYLPLPYICR IVDCYFAEGH KFLIRSAISI 360
  361 VYIWSKVHKR GMEDFRGKSL QEKIDSIKKE FQDVATNISV STSTFIATAV KIRNLQSATI 420
  421 AKLQAQFEDE LRDEVTSRPR QIKKVRRTIF CEAFKSCLVD NDSAVELMSY MPPRLQLVTP 480
  481 TLAYQLSQDG TSFYNFWSKV DPLDQTIIII KSTCGAIFGA YCSSTWSERH DRKERTRSKY 540
  541 WGTGESYVFR MNKEMELPEI YTWVGNSPDV SSDKCPQYFM SATDKSFVIG SGGRDAIRID 600
  601 EELTHGITGP SSTFNSPQLC EDGAFDIYEL EVFHVTSSD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..115] MSA 1.26799 View MSA. No confident structure predictions are available.
    2 View Details [116..458] PSI-BLAST 25.0 No description for 2g77A was found.
    3 View Details [459..562] deduced N/A No confident structure predictions are available.
    4 View Details [563..639] MSA 6.207995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle