| Protein: | gro-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 430 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gro-1.
| Description | E-value | Query Range |
Subject Range |
|
|
392.0 | [0..15] | [426..20] |
|
Region A: Residues: [1-360] |
1 11 21 31 41 51
| | | | | |
1 MIFRKFLNFL KPYKMRTDPI IFVIGCTGTG KSDLGVAIAK KYGGEVISVD SMQFYKGLDI 60
61 ATNKITEEES EGIQHHMMSF LNPSESSSYN VHSFREVTLD LIKKIRARSK IPVIVGGTTY 120
121 YAESVLYENN LIETNTSDDV DSKSRTSSES SSEDTEEGIS NQELWDELKK IDEKSALLLH 180
181 PNNRYRVQRA LQIFRETGIR KSELVEKQKS DETVDLGGRL RFDNSLVIFM DATPEVLEER 240
241 LDGRVDKMIK LGLKNELIEF YNEHAEYINH SKYGVMQCIG LKEFVPWLNL DPSERDTLNG 300
301 DKLFKQGCDD VKLHTRQYAR RQRRWYRSRL LKRSDGDRKM ASTKMLDTSD KYRIISDGMD 360
361
|
| Detection Method: |  |
| Confidence: | 93.0 |
| Match: | 2qgnA |
| Description: | No description for 2qgnA was found. |
|
Region A: Residues: [361-430] |
1 11 21 31 41 51
| | | | | |
1 IVDQWMNGID LFEDISTDTN PILKGSDANI LLNCEICNIS MTGKDNWQKH IDGKKHKHHA 60
61 KQKKLAETRT
|
| Detection Method: | |
| Confidence: | 1.71 |
| Match: | 1zr9A |
| Description: | Solution Structure of a Human C2H2-type Zinc Finger Protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleic acid binding | 2.37910043444615 | bayes_pls_golite062009 |
| DNA binding | 2.34410707831983 | bayes_pls_golite062009 |
| transcription regulator activity | 2.33505949768575 | bayes_pls_golite062009 |
| binding | 2.15905417087312 | bayes_pls_golite062009 |
| transcription factor activity | 1.47482918271021 | bayes_pls_golite062009 |
| protein binding | 0.852654490075478 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.642848769534094 | bayes_pls_golite062009 |
| RNA binding | 0.332063226840189 | bayes_pls_golite062009 |
| transcription activator activity | 0.294719498389745 | bayes_pls_golite062009 |
| catalytic activity | 0.263007611601737 | bayes_pls_golite062009 |
