| Protein: | pccb-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 522 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pccb-1.
| Description | E-value | Query Range |
Subject Range |
|
|
608.0 | [0..16] | [522..3] |
|
Region A: Residues: [1-522] |
1 11 21 31 41 51
| | | | | |
1 MKSEKPTRAT SSIAHTIKVA HKIDETREKA LLGGGKKRVD AQHARGKLTA RERIDLLLDR 60
61 NTFREYDMFA EHTCNDFGMQ KEKYPGDSVV TGRGEINGRT VFVFSQDFTV FGGSLSSIHA 120
121 KKIVKIMREA MLVGAPVIGL NDSGGARIQE GVESLAGYAD IFQENVMASG VVPQISMIMG 180
181 PCAGGAVYSP ALTDFTFMVR DTSYLFITGP DVVKAVTNEE VTQEELGGAK THTVTSGVAH 240
241 GAFDNDVDAL MSLRELFNYL PLSNTDAAPI RAAEDPWDRA VPSLDTVVPL ESTAAYNMKD 300
301 VVHALVDEGD FFEIMPDYAK NLVIGFARMN GRTVGIVGNN PKFAAGCLDI NSSVKGARFV 360
361 RFCDAFNIPI ITLVDVPGFL PGTAQEYGGI IRHGAKLLYA FAEATVPKIT IITRKAFGGA 420
421 YDVMSSKHLR GDINYAWPTA EVAVMGAKGA VSILFRNDKE HAVQHEEEYT ELFSNPFPAA 480
481 VRGFVDDIII PSETRKKVCE DLNMLESKKL KNPWKKHGNI PL
|
| Detection Method: |  |
| Confidence: | 166.0 |
| Match: | 1vrgA |
| Description: | Crystal structure of propionyl-CoA carboxylase, beta subunit (TM0716) from THERMOTOGA MARITIMA at 2.30 A resolution |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| CoA carboxylase activity | 4.38629333084302 | bayes_pls_golite062009 |
| acetyl-CoA carboxylase activity | 4.36332808516753 | bayes_pls_golite062009 |
| ligase activity, forming carbon-carbon bonds | 4.29345455730254 | bayes_pls_golite062009 |
| enoyl-CoA hydratase activity | 3.92947460544831 | bayes_pls_golite062009 |
| methylcrotonoyl-CoA carboxylase activity | 2.85169024122548 | bayes_pls_golite062009 |
| 3-hydroxyacyl-CoA dehydrogenase activity | 2.44182589784656 | bayes_pls_golite062009 |
| dodecenoyl-CoA delta-isomerase activity | 1.80820904754223 | bayes_pls_golite062009 |
| catalytic activity | 1.46154163027498 | bayes_pls_golite062009 |
| propionyl-CoA carboxylase activity | 1.20853698666984 | bayes_pls_golite062009 |
| ligase activity | 0.98581896521131 | bayes_pls_golite062009 |
| binding | 0.578223105269736 | bayes_pls_golite062009 |
| 3-hydroxybutyryl-CoA epimerase activity | 0.241955774397835 | bayes_pls_golite062009 |
| racemase and epimerase activity, acting on hydroxy acids and derivatives | 0.099208209617217 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity, transposing C=C bonds | 0.0918189681606029 | bayes_pls_golite062009 |
