| Protein: | lin-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 423 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
|
Region A: Residues: [1-207] |
1 11 21 31 41 51
| | | | | |
1 MRKMLLFCIL LLFMPQFTVS ESCLPSWFRQ ERSAPEQLQS AENAAENSGS VPPDTSRNSL 60
61 ETNEIGDAPS STSTPETPTE TTISEAGDDE KRTEEVAKEL IEKEAEYEGE YEDEKVDEEV 120
121 EEALKYNEDA TQDATSTLKP AVRKEIEKLK EAKCKDYCHH NATCHVEVIF REDRVSAVVP 180
181 SCHCPQGWEG TRCDRHYVQA FYAPING
|
| Detection Method: |  |
| Confidence: | 7.0 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| epidermal growth factor receptor binding | 4.60166610111644 | bayes_pls_golite062009 |
| receptor binding | 3.10014156620054 | bayes_pls_golite062009 |
| ErbB-2 class receptor binding | 2.49988032150831 | bayes_pls_golite062009 |
| ErbB-3 class receptor binding | 2.42594378586851 | bayes_pls_golite062009 |
| binding | 2.33940742543305 | bayes_pls_golite062009 |
| protein binding | 1.97546801934296 | bayes_pls_golite062009 |
| growth factor activity | 1.86884324063738 | bayes_pls_golite062009 |
| signal transducer activity | 1.66401431847753 | bayes_pls_golite062009 |
| molecular transducer activity | 1.66401431847753 | bayes_pls_golite062009 |
| transcription factor binding | 0.795087651578297 | bayes_pls_golite062009 |
|
Region A: Residues: [208-423] |
1 11 21 31 41 51
| | | | | |
1 RYNQSSTSAI PAFAFLIVML IMFITIVVYA YRRMSKRSDD MTYTMSHMCP PEAFNVLKTP 60
61 NGRHIPVHQI PSCSYTIPTP GTVPPNISST PGSRIPTRQQ AIRNNEQARN NFFSILRSQG 120
121 TIPSRSINDD DTPKHYKSVP RVEVSAINYS GHIDFSTVSY QSTESEVSKA SVTCPPPAHT 180
181 VINIELDSAD TNFRSPSRSS GEQGSPATCE PMIRHT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
