| Protein: | rsr-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 601 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rsr-1.
| Description | E-value | Query Range |
Subject Range |
|
|
234.0 | [0..76] | [600..699] |
|
Region A: Residues: [1-137] |
1 11 21 31 41 51
| | | | | |
1 MDAGYFRGAN SEQDGRFSDK EKKLLKTMKF EPQLEQKIDL NRCNMDVIKP WITARVNDIL 60
61 GMEDDVVVEY ILSQIDDKNL NPKLLQINVT GFLNARRARE FVGDLWNLLI EANASEDGIP 120
121 ASLVNQKMAE MKTNDRD
|
| Detection Method: |  |
| Confidence: | 48.045757 |
| Match: | 1mp1A |
| Description: | Solution structure of the PWI motif from SRm160 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [138-185] |
1 11 21 31 41 51
| | | | | |
1 EKGDDREDND WTNRYKTLSN GRYTGPAREK AVRDDRIPAR ALSPRKTP
|
| Detection Method: | |
| Confidence: | 1.05 |
| Match: | 1qd7B |
| Description: | 30S subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [186-265] |
1 11 21 31 41 51
| | | | | |
1 PRRNASPGGD GGGGSPAARR GGSAGNRRRS PPRRGSPRRG SPRRDTRRSP PRRRGSPPAR 60
61 GGDRRDRRED RRPVRDEKER
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [266-447] |
1 11 21 31 41 51
| | | | | |
1 EEESRRREIE RKKRHEEAEL RQKAIASVAA RAKSGSPRRR RSPSASKSPP PARRRRSPSQ 60
61 SKSPAPKRAK SRSKSPPAPA RRRRSPSASK SPPPAPKRAK SRSKSPPARR RRSPSASKSP 120
121 PAPRRRRSPS KSRSPAPKRE IPPARRRRSP SASKSPPAPK RAKSRSKSPP APRRRRSPSQ 180
181 SK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [448-601] |
1 11 21 31 41 51
| | | | | |
1 SPAPRRRRSP SKSPQAPRRR RSPSGSKSRS PRRRRSPAAA PRRRQSPQRR RSPRRRRSPS 60
61 SSSRSRSPPP PPRRPRQDSE QQAPVAVKSP EMKKRRPNDT DSDVSVDSEA EEERRRKKAK 120
121 KEKKAAKKHK KEKKSKKHRK RRSPSASESG SESD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
