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Protein Overview: rsr-1

General Information:
Name(s) found: rsr-1 / CE30346 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00004706 locus:rsr-1 status:Partially_confirmed UniProt:O62185 protein_id:CAB04214.3 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 601 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    gastrulation with mouth forming first [IMPLink to PubMed article]
    mRNA processing [IEALink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAGYFRGAN SEQDGRFSDK EKKLLKTMKF EPQLEQKIDL NRCNMDVIKP WITARVNDIL  60
   61 GMEDDVVVEY ILSQIDDKNL NPKLLQINVT GFLNARRARE FVGDLWNLLI EANASEDGIP 120
  121 ASLVNQKMAE MKTNDRDEKG DDREDNDWTN RYKTLSNGRY TGPAREKAVR DDRIPARALS 180
  181 PRKTPPRRNA SPGGDGGGGS PAARRGGSAG NRRRSPPRRG SPRRGSPRRD TRRSPPRRRG 240
  241 SPPARGGDRR DRREDRRPVR DEKEREEESR RREIERKKRH EEAELRQKAI ASVAARAKSG 300
  301 SPRRRRSPSA SKSPPPARRR RSPSQSKSPA PKRAKSRSKS PPAPARRRRS PSASKSPPPA 360
  361 PKRAKSRSKS PPARRRRSPS ASKSPPAPRR RRSPSKSRSP APKREIPPAR RRRSPSASKS 420
  421 PPAPKRAKSR SKSPPAPRRR RSPSQSKSPA PRRRRSPSKS PQAPRRRRSP SGSKSRSPRR 480
  481 RRSPAAAPRR RQSPQRRRSP RRRRSPSSSS RSRSPPPPPR RPRQDSEQQA PVAVKSPEMK 540
  541 KRRPNDTDSD VSVDSEAEEE RRRKKAKKEK KAAKKHKKEK KSKKHRKRRS PSASESGSES 600
  601 D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..137] PSI-BLAST 48.045757 Solution structure of the PWI motif from SRm160
    2 View Details [138..185] FFAS03 1.05 30S subunit
    3 View Details [186..265] deduced N/A No confident structure predictions are available.
    4 View Details [266..447] MSA 3.190997 View MSA. No confident structure predictions are available.
    5 View Details [448..601] MSA 3.180982 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle