| Protein: | unc-94 |
| Organism: | Caenorhabditis elegans |
| Length: | 392 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-94.
| Description | E-value | Query Range |
Subject Range |
|
|
222.0 | [0..32] | [380..34] |
|
Region A: Residues: [1-202] |
1 11 21 31 41 51
| | | | | |
1 MSQAKTDYYS EEKTFSAPSA NSQQGTQLPS KVYNKGLKDL EDNDIEGLLS SLSIDELEDL 60
61 NNDFDPDNSM LPPSQRCRDQ TDKEPTGPYK RDNLLKFLED KAKTEKDWED VCPYTPGQKR 120
121 GKVYDSDSGR NSEEPENGKM EMPIEIDLDD DEEELECALV TAPEKDLVDL AGILGMHNVL 180
181 NQPQYYNALK GKTQDESTGT TF
|
| Detection Method: |  |
| Confidence: | 9.920819 |
| Match: | PF03250.5 |
| Description: | No description for PF03250.5 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [203-392] |
1 11 21 31 41 51
| | | | | |
1 NGIMQSYVPR IVPDEPDNDT DVESCINRLR EDDTDLKEVN INNMKRVSKE RIRSLIEAAC 60
61 NSKHIEKFSL ANTAISDSEA RGLIELIETS PSLRVLNVES NFLTPELLAR LLRSTLVTQS 120
121 IVEFKADNQR QSVLGNQVEM DMMMAIEENE SLLRVGISFA SMEARHRVSE ALERNYERVR 180
181 LRRLGKDPNV
|
| Detection Method: | |
| Confidence: | 19.09691 |
| Match: | 1pgvA |
| Description: | Tropomodulin C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| microtubule minus-end binding | 7.70887263207962 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 5.04595324782806 | bayes_pls_golite062009 |
| actin binding | 4.98528043340021 | bayes_pls_golite062009 |
| tropomyosin binding | 2.80631683562112 | bayes_pls_golite062009 |
| binding | 2.665591019824 | bayes_pls_golite062009 |
| protein binding | 2.66138763326419 | bayes_pls_golite062009 |
| myosin binding | 1.32546860780591 | bayes_pls_golite062009 |
| tubulin binding | 1.00494145757097 | bayes_pls_golite062009 |
| microtubule binding | 0.854246295331667 | bayes_pls_golite062009 |
| catalytic activity | 0.143741655309638 | bayes_pls_golite062009 |
| Ras GTPase activator activity | 0.0986232864289136 | bayes_pls_golite062009 |
