| Protein: | apn-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 396 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for apn-1.
| Description | E-value | Query Range |
Subject Range |
|
|
270.0 | [0..117] | [391..1] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MANKKVTFRE DVKSPAIRKL KQKLTPLKIK KGRGKIQKHI QKTLQKMKEE EESENQSPGT 60
61 TVEETLTEEN ISTDKEETSK LENKPKKTRK TSGETIAQKK SRETVGVEVL KT
|
| Detection Method: |  |
| Confidence: | 0.981 |
| Match: | 2d57A |
| Description: | Double layered 2D crystal structure of AQUAPORIN-4 (AQP4M23) at 3.2 a resolution by electron crystallography |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [113-396] |
1 11 21 31 41 51
| | | | | |
1 SEGSSKMLGF HVSAAGGLEQ AIYNARAEGC RSFAMFVRNQ RTWNHKPMSE EVVENWWKAV 60
61 RETNFPLDQI VPHGSYLMNA GSPEAEKLEK SRLAMLDECQ RAEKLGITMY NFHPGSTVGK 120
121 CEKEECMTTI AETIDFVVEK TENIILVLET MAGQGNSIGG TFEELKFIID KVKVKSRVGV 180
181 CIDTCHIFAG GYDIRTQKAY EEVMKNFGEV VGWNYLKAIH INDSKGDVGS KLDRHEHIGQ 240
241 GKIGKAAFEL LMNDNRLDGI PMILETPEGK YPEEMMIMYN MDKR
|
| Detection Method: | |
| Confidence: | 71.0 |
| Match: | 1qtwA |
| Description: | Endonuclease IV |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.66019571685402 | bayes_pls_golite062009 |
| deoxyribonuclease activity | 0.97458966528485 | bayes_pls_golite062009 |
| DNA-(apurinic or apyrimidinic site) lyase activity | 0.36517654808269 | bayes_pls_golite062009 |
| endodeoxyribonuclease activity | 0.19550406288989 | bayes_pls_golite062009 |
