| Protein: | nas-25 |
| Organism: | Caenorhabditis elegans |
| Length: | 399 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nas-25.
| Description | E-value | Query Range |
Subject Range |
|
|
273.0 | [0..16] | [398..64] |
|
Region A: Residues: [1-243] |
1 11 21 31 41 51
| | | | | |
1 MQIYLGITIC LVAFLTVIDC AIPYYRTHSN FGSLGRRKVR QVQRDLTYRW PNNTVPYYVG 60
61 NVTSTIKKSV RLAIEELQAW TCIRFQNVNE KYSDGDSVRI VDLGSCSSPI GRQQIGTQDV 120
121 SLTKNCWGMG TAIHELMHAI GIEHTQSRSD RNRYLDILAQ NIDNRDLPNF ELLSPRLWAN 180
181 LVPYDYGSVM HYSADSFSNK DDEQTMLPKD RSFIETMGSM IPNFYDFDQI NQYYQCYDSC 240
241 RNA
|
| Detection Method: |  |
| Confidence: | 33.522879 |
| Match: | 1astA |
| Description: | STRUCTURE OF ASTACIN AND IMPLICATIONS FOR ACTIVATION OF ASTACINS AND ZINC-LIGATION OF COLLAGENASES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.361128926739778 | bayes_pls_golite062009 |
| hydrolase activity | 0.29183147920977 | bayes_pls_golite062009 |
| peptidase activity | 0.23695590197447 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 0.0341081586881899 | bayes_pls_golite062009 |
|
Region A: Residues: [244-399] |
1 11 21 31 41 51
| | | | | |
1 GQLANCANGG IPNPNNCQVC NCPMGYGGDL CDQRPEGCGS TLVATDRWQK QKLSVRFSRN 60
61 DDQYFTFCNS WIVGPSDRTL QVIYEITSDS IRRQICSFGC YEGGIEVKHL QDPRITNDRD 120
121 CCLNTPLNLT TTVNPLPVIL YTSGATVTYD FSYRYV
|
| Detection Method: | |
| Confidence: | 17.522879 |
| Match: | 1nt0A |
| Description: | Mannose-binding protein associated serine protease 2, MASP2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.286076792172079 | bayes_pls_golite062009 |
| protein binding | 0.14494900666454 | bayes_pls_golite062009 |
