| Protein: | wapl-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 748 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
|
Region A: Residues: [1-141] |
1 11 21 31 41 51
| | | | | |
1 MSSDANSDDP FSKPIVRKRF QATLAQQGIE DDQLPSVRSS DSPDVPDTPD VPVNQLSSPP 60
61 LSLPETLSEG NAETLQNLSD DSEPEMLSQS STSSLNRRME DSAIDPSRGT RKSQSRGFDY 120
121 DPAGERTTAP VQKKKKDEID M
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [142-748] |
1 11 21 31 41 51
| | | | | |
1 GGAKFFPKQE KKHVYTHKWT TEEDDEDEKT ISSSSNRYSS RPNQPAVSAR PRQPVYATTS 60
61 TYSKPLASGY GSRVRHIKEA NELRESGEYD DFKQDLVYIL SSLQSSDASM KVKCLSAISL 120
121 AKKCVSPDFR QFIKSENMTK SIVKALMDSP EDDLFALAAS TVLYLLTRDF NSIKIDFPSL 180
181 RLVSQLLRIE KFEQRPEDKD KVVNMVWEVF NSYIEKQEVG GQKVSFDMRK ESLTPSSLII 240
241 EALVFICSRS VNDDNLKSEL LNLGILQFVV AKIETNVNLI ADNADDTYSI LILNRCFRIL 300
301 ESSSVFHKKN QAFLISHRSN ILISSLAKFL QVILDRVHQL AEEEVKKYIS CLALMCRLLI 360
361 NISHDNELCC SKLGQIEGFL PNAITTFTYL APKFGKENSY DINVMMTSLL TNLVERCNAN 420
421 RKVLIAQTVK MVIPGHDVEE VPALEAITRL FVYHESQAQI VDADLDRELA FDEGGCGDEE 480
481 EEEEGGDESS DEDGVRKDGR LDRNKMDRMD QVDVVHALQQ VMNKASAHME GSVIASYHAL 540
541 LVGFVLQQNE DHLDEVRKHL PGKNFQNMIS QLKRLYDFTK ATMAKRVESN SGFRAIERVI 600
601 EYLERLE
|
| Detection Method: | |
| Confidence: | 0.985 |
| Match: | 1wa5B |
| Description: | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.4227425773296 | bayes_pls_golite062009 |
| protein binding | 0.79300810988911 | bayes_pls_golite062009 |
