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View Structure Prediction Details

Protein: CE28745
Organism: Caenorhabditis elegans
Length: 363 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE28745.

Description E-value Query
Range
Subject
Range
gi|7506249 - gi|7506249|pir||T30965 hypothetical protein R04B3.2 - Caenorhabditis elegans
376.0 [0..1] [363..1]

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Predicted Domain #1
Region A:
Residues: [1-363]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRFYIFLLL IPYINGTIND DSLPMVITTW GSDGFKKATK NAVDATLLGG RMFGLVEGLS  60
   61 TCEALQCDTT VGYGGSPDEN GETCLDSLVI DADGMRVGAV ANLHRIRDAA RVAWGVMNFT 120
  121 KHTLLVGESA TQFAKTLGFK EEDLSTEETK SWISKWKTEK CQPNFWKNVS PDPSSSCGPY 180
  181 KTNPLTKSMR YYSLVNQSDE AGYLVEKTNH DTIGMVVRDT ENIFSAGTSS NGARFKIPGR 240
  241 VGDSPIPGAG AYANKFGGAA ATGDGDVMMR FLPSFFAVTQ MELGTKPSKA AYKAITRILK 300
  301 VFPKFSGAVV AMNVKGRIGA SCANINKFGY NVAFQNGTVV TYSISCLKEV NSLKYLKEGI 360
  361 EFA

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Detection Method: PSI-BLAST
Confidence: 81.154902
Match: 1p4kA
Description: Glycosylasparaginase (aspartylglucosaminidase, AGA)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity 6.05119945958507 bayes_pls_golite062009
asparaginase activity 4.42189051422188 bayes_pls_golite062009
peptidase activity 3.38733168359688 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 3.03788973144293 bayes_pls_golite062009
endopeptidase activity 2.9540890713795 bayes_pls_golite062009
hydrolase activity 2.94435862073675 bayes_pls_golite062009
asparagine synthase (glutamine-hydrolyzing) activity 2.93045515439744 bayes_pls_golite062009
catalytic activity 1.19663085909195 bayes_pls_golite062009
nucleic acid binding 0.378514472331937 bayes_pls_golite062009
carbon-nitrogen ligase activity, with glutamine as amido-N-donor 0.235585044844293 bayes_pls_golite062009
binding 0.159226414314936 bayes_pls_golite062009
protein binding 0.00621436730716318 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle