| Protein: | egl-13 |
| Organism: | Caenorhabditis elegans |
| Length: | 470 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for egl-13.
| Description | E-value | Query Range |
Subject Range |
|
|
301.0 | [0..1] | [470..1] |
|
Region A: Residues: [1-84] |
1 11 21 31 41 51
| | | | | |
1 MSRRRKANPT KLSENAKKLA KEVENSQEEN DCDMLAKPQT PTIIIPGHMD DTPNPAGSPH 60
61 DASIKSSSST ISDHTSTSAT TGIS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [85-141] |
1 11 21 31 41 51
| | | | | |
1 DFPDILAQTE HGCSVLIDGN HLREIINSVD TQDGKQDLLS DVIRQLTSIK ERLTNDE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [142-326] |
1 11 21 31 41 51
| | | | | |
1 SPVKDDLKED PDDMSPMLHA GNFDSEMLLR QHELMQHQQQ QMIIANMLKA TQSLPLLFNG 60
61 GLNYEAILNN PVLNATIAGH LPNPLASNIS LLQKSISAKL AAAGNMQTVE KVETPLNLSK 120
121 DTPSPTAIPQ SPLSGFRLPY SLGTNYGSDG QLFNNCSPNS SGKSTPGNTS VTSEVATPRP 180
181 QAKSP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [327-470] |
1 11 21 31 41 51
| | | | | |
1 NHIKRPMNAF MVWARDERRK ILKAYPDMHN SNISKILGSR WKGMSNSEKQ PYYEEQSRLS 60
61 KLHMEQHPDY RYRPRPKRTC VIDGKKVRVN EYKTIMKTKK DLMWGDEPGF SQPSDLQMDL 120
121 ASHVNLLNDL TQHHHQSHLL QTAE
|
| Detection Method: | |
| Confidence: | 35.30103 |
| Match: | 2gzkA |
| Description: | No description for 2gzkA was found. |
| Term | Confidence | Notes |
| binding | 2.13364477654991 | bayes_pls_golite062009 |
| DNA binding | 1.53868224871484 | bayes_pls_golite062009 |
| transcription regulator activity | 1.08780465158402 | bayes_pls_golite062009 |
| nucleic acid binding | 0.818311652354687 | bayes_pls_golite062009 |
| transcription factor activity | 0.53515597626729 | bayes_pls_golite062009 |
| protein binding | 0.436111251185035 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.42024807191387 | bayes_pls_golite062009 |
