| Protein: | egl-18 |
| Organism: | Caenorhabditis elegans |
| Length: | 376 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for egl-18.
| Description | E-value | Query Range |
Subject Range |
|
|
151.0 | [0..1] | [353..1] |
|
Region A: Residues: [1-170] |
1 11 21 31 41 51
| | | | | |
1 MSISIMTETR PESAEQQHHE VLQRPSDEPC SGCKQLQKDV AKTISMVMER MDKLQYRLDE 60
61 LLKENNELKS SSVSSGKASP SPAESRSSPK LVETVVAPVS GARKRKPKER SPPAAASPLP 120
121 DFSNLMNGFM FDPLNMSNPN GMMQLLSMVQ QQQQQQQHHQ HIENQQSVSP
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [171-261] |
1 11 21 31 41 51
| | | | | |
1 PQSKSVKIED PMDQDVKQEE SERSDIPTAT EAQNLLDALT AQFSSNGQAT STTSPPSSSS 60
61 QVQAVIEAVA TPSSQSQDSS MFEKTETSGD P
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [262-376] |
1 11 21 31 41 51
| | | | | |
1 NAARCSNCRT DKTTAWRRDA EGKLVCNPCG LYYRLHKVRR PIEMRKNHIQ QRYRRKNKEK 60
61 ESSAATQIFN QLLTQMPTMA TGGVSTDGAI NTFNLLEQIS QFTQAQELMN SSATF
|
| Detection Method: | |
| Confidence: | 15.154902 |
| Match: | 2gatA |
| Description: | Erythroid transcription factor GATA-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.42599378647208 | bayes_pls_golite062009 |
| protein binding | 0.576254539963841 | bayes_pls_golite062009 |
| transcription regulator activity | 0.50063581643098 | bayes_pls_golite062009 |
| DNA binding | 0.15755076348446 | bayes_pls_golite062009 |
