| Protein: | ars-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 793 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ars-1.
| Description | E-value | Query Range |
Subject Range |
|
|
993.0 | [0..23] | [792..4] |
|
Region A: Residues: [1-492] |
1 11 21 31 41 51
| | | | | |
1 MGIGSKILEN NIQKSISLGF YHSHSELRKS FYEFFKSKNH EILRSSSVIP DENDGTLLFT 60
61 NAGMNQFKPL ILSSTESRRV ANIQKCIRAG GKHNDLDDVG KDLHHQTFFE MMGNWSFNDA 120
121 FSKEEACRYA WEYLVEILGI NADRLYVSYF GGIEKLGLPE DRECREIWKR IGVSSNRILP 180
181 FVAENFWEMG AAGPCGPCTE IHYDRIGGRD ASRLVNIDDS VVEIWNIVFM SSVRDSCGQI 240
241 RHLGKNHIDT GMGFERLLSV VQNKTSNFDT DVFTPILEKT SELAKKQYTG SLDSRQDATF 300
301 RLVADHIRAA TVAISDGAVP DGTGCGFIVR KMMRRAFLQG ISKLGIERYA MSELVPVVAS 360
361 TMKEVYPEIH DTSTHIRKIF NDEEAQFWKT VDKAKKMFDS VAAESKSPII SGRKAFNLFE 420
421 THGLPLAVTV ELARNIGREV DETEFERCRL EAQKVSQKAS QFKLPISADD FPSHSDKEKY 480
481 SYVFRNGKYE FP
|
| Detection Method: |  |
| Confidence: | 178.0 |
| Match: | 1riqA |
| Description: | The crystal structure of the catalytic fragment of the alanyl-tRNA synthetase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming carbon-oxygen bonds | 7.89468709683036 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.89468709683036 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.88410036819636 | bayes_pls_golite062009 |
| ligase activity | 6.92073480193262 | bayes_pls_golite062009 |
| alanine-tRNA ligase activity | 6.00693881794242 | bayes_pls_golite062009 |
| phenylalanine-tRNA ligase activity | 2.76416144738864 | bayes_pls_golite062009 |
| threonine-tRNA ligase activity | 2.18642354927 | bayes_pls_golite062009 |
| glycine-tRNA ligase activity | 2.17047432052132 | bayes_pls_golite062009 |
| serine-tRNA ligase activity | 2.07594942154162 | bayes_pls_golite062009 |
| catalytic activity | 1.99372273395202 | bayes_pls_golite062009 |
| lysine-tRNA ligase activity | 1.72324031407565 | bayes_pls_golite062009 |
| histidine-tRNA ligase activity | 1.72215103383322 | bayes_pls_golite062009 |
| asparagine-tRNA ligase activity | 0.921492123574877 | bayes_pls_golite062009 |
| binding | 0.705666054154871 | bayes_pls_golite062009 |
| aspartate-tRNA ligase activity | 0.00572514744734753 | bayes_pls_golite062009 |
|
Region A: Residues: [493-793] |
1 11 21 31 41 51
| | | | | |
1 QVKTRILQVY KDQQKAESLE ANDRGFLVLE ECQFYGEQGG QTSDTGHLLI DGREVFEVEN 60
61 AKKIAGGAVT VLFGRALLPI RRDLRVEQKL DETRREGVMR AHSATHLLNW ALQKLGVGSG 120
121 QKGSSVDCDR FRFDYSTGDE DLSKEQRTEL LIKCEMKMRE FIQNGGFTEI IETSLEEAKK 180
181 IENLQSDVKE DRIGGASVRV VALGSGADVP VECCSGTHIH DVRVIDDVAI MSDKSMGQRL 240
241 RRIIVLTGKE AAACRNYTKS IYEDLRSTDP KERSKTGKNI DWKRVPIADQ ARISILLKQK 300
301 K
|
| Detection Method: | |
| Confidence: | 65.39794 |
| Match: | 1qf6A |
| Description: | Threonyl-tRNA synthetase (ThrRS), C-terminal domain; Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain; Threonyl-tRNA synthetase (ThrRS), second 'additional' domain; Threonyl-tRNA synthetase (ThrRS) |
Matching Structure (courtesy of the PDB): |
|
