| Protein: | mig-5 |
| Organism: | Caenorhabditis elegans |
| Length: | 625 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mig-5.
| Description | E-value | Query Range |
Subject Range |
|
|
430.0 | [0..1] | [625..1] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MEPPCTSDCS QIKVFYYLDD ETTPYVSVIE AREGVATLGN FKNSFTKRGY KYYAKELDPD 60
61 IQREVKVELT TDSDRLRKSQ NGFYEIFLVS TPGYGTLPRN SGT
|
| Detection Method: |  |
| Confidence: | 7.30103 |
| Match: | 1wspA |
| Description: | Crystal structure of axin dix domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [104-171] |
1 11 21 31 41 51
| | | | | |
1 MTRPQRTALD KRRRRSADFD ATPYSDASLA PSTIVSRRAG EHLAELYTSN SEDPYQYDEH 60
61 TRRTGDDS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [172-320] |
1 11 21 31 41 51
| | | | | |
1 SLYEPLAARD MNKIYDDDRR RKKQKKERFR RPYVPSTISS ATESSVNSGL PRILEIYLPM 60
61 KNVPYLGLSV CTIDGHIFVS EIAPEGAVEK DGRVNVGDQI LQVNRVSFEE LSGPQAVRSL 120
121 REAASSKRQN TEKMKALGLD PQEQTATTI
|
| Detection Method: | |
| Confidence: | 20.0 |
| Match: | 1z87A |
| Description: | solution structure of the split PH-PDZ Supramodule of alpha-Syntrophin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [321-469] |
1 11 21 31 41 51
| | | | | |
1 DDGTLPFTST ASDDEERMLY DQRRNGIPRA LIEEAERKRE NEQNEKIEQL TEMIDPIIVV 60
61 RSMARPDSGL AVKNRKWLKI LVPMSFIGRD LVDWLVDHMA DIHNRKKARI YAARLLAAGL 120
121 IRHVVSKLTF TEKCYYVFGD GILGNDRNS
|
| Detection Method: | |
| Confidence: | 17.154902 |
| Match: | 1fshA |
| Description: | Segment polarity protein Dishevelled-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 2.04426015975991 | bayes_pls_golite062009 |
| binding | 1.99063774159045 | bayes_pls_golite062009 |
| DNA binding | 1.63968725174405 | bayes_pls_golite062009 |
| nucleic acid binding | 1.51035375793093 | bayes_pls_golite062009 |
| transcription factor activity | 1.16072080355661 | bayes_pls_golite062009 |
| transcription activator activity | 0.14130464856269 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.13573040816325 | bayes_pls_golite062009 |
|
Region A: Residues: [470-625] |
1 11 21 31 41 51
| | | | | |
1 TDTTGTSGTT MRVEATTEVT YVGSPAPHAL AARVGRNIPH RLETTTLSPV AHDQTWLRRR 60
61 RDCESPMTND YASMVGESQI GMNPVGNYHV FGTKNNHRQV PAPSQVTSSS LTNVTNSRKW 120
121 WLRRPSADSS IQYYGSSSFS DSVAERSQPR FRRGEQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
