| Protein: | lin-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 438 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
|
Region A: Residues: [1-108] |
1 11 21 31 41 51
| | | | | |
1 MRKMLLFCIL LLFMPQFTVS ESCLPSWFRQ ERSAPEQLQS AENAAENSGS VPPDTSRNSL 60
61 ETNEIGDAPS STSTPETPTE TTISEAGDDE KRTEEVAKEL IEKEAEYE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [109-227] |
1 11 21 31 41 51
| | | | | |
1 GEYEDEKVDE EVEEALKYNE DATQDATSTL KPAVRKEIEK LKEAKCKDYC HHNATCHVEV 60
61 IFREDRVSAV VPSCHCPQGW EGTRCDRHYV QAFYAPINGR YNVRLSTMSS TAQLLVQQS
|
| Detection Method: | |
| Confidence: | 0.996 |
| Match: | 1wheA |
| Description: | COAGULATION FACTOR, NMR, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| epidermal growth factor receptor binding | 4.08248920636506 | bayes_pls_golite062009 |
| receptor binding | 2.76510818289785 | bayes_pls_golite062009 |
| ErbB-2 class receptor binding | 1.90147602324004 | bayes_pls_golite062009 |
| ErbB-3 class receptor binding | 1.85625693531369 | bayes_pls_golite062009 |
| signal transducer activity | 1.66370136016696 | bayes_pls_golite062009 |
| molecular transducer activity | 1.66370136016696 | bayes_pls_golite062009 |
| binding | 1.62855234773036 | bayes_pls_golite062009 |
| growth factor activity | 1.47902993477961 | bayes_pls_golite062009 |
| transcription factor binding | 0.568897560911761 | bayes_pls_golite062009 |
| protein binding | 0.448653666571103 | bayes_pls_golite062009 |
|
Region A: Residues: [228-438] |
1 11 21 31 41 51
| | | | | |
1 STSAIPAFAF LIVMLIMFIT IVVYAYRRMS KRSDDMTYTM SHMCPPEAFN VLKTPNGRHI 60
61 PVHQIPSCSY TIPTPGTVPP NISSTPGSRI PTRQQAIRNN EQARNNFFSI LRSQGTIPSR 120
121 SINDDDTPKH YKSVPRVEVS AINYSGHIDF STVSYQSTES EVSKASVTCP PPAHTVINIE 180
181 LDSADTNFRS PSRSSGEQGS PATCEPMIRH T
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
