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View Structure Prediction Details

Protein: CE27734
Organism: Caenorhabditis elegans
Length: 390 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE27734.

Description E-value Query
Range
Subject
Range
gi|110593868, gi... - gi|121593265|ref|YP_985161.1| GTPase ObgE [Acidovorax sp. JS42], gi|120605345|gb|ABM41085.1| GTP1/OB...
296.0 [0..1] [347..1]

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Predicted Domain #1
Region A:
Residues: [1-390]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLTLLLRET ISQVQKLIKD DLNVLKIDKY LVNIKAGSGG SGLSRYNGVG GNGGDIYFVA  60
   61 KPSLAFTDIK KRLKNKMKIR SENGEAATKI MLIGQHAKHQ FFDVPVGIEV VDREKNKLIA 120
  121 RCSKPFHRYL IARGGEGGYS KIGYKGSKGD TFDVEIHLKL RPNIGLLGFP NAGKSTLLKA 180
  181 LVPEKSVKIA DYAFTTVNPQ VAFFKNKEEF SVEDPSFTLS IADLPGIIEG ASMNRGKGYK 240
  241 FLKHLEYADI VVMVVDCQGF QLKNELDCPF RNPLESIALL NREVELYNQK LARKPVICVL 300
  301 NKIDALDENE KTNISSLAKS LQSQKWIDMV PEEMRPKIPM RFEHVVQLSA RSGKIDEFTN 360
  361 VLKLMRHHLH ALKDVQDNPE NTKHVKKRFL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.30103
Match: 1udxA
Description: Crystal structure of the conserved protein TT1381 from Thermus thermophilus HB8
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.11019906626642 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.788887365520783 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.787931859014298 bayes_pls_golite062009
pyrophosphatase activity 0.497191485940443 bayes_pls_golite062009
catalytic activity 0.458437698837681 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle