| Protein: | grp-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 393 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for grp-1.
| Description | E-value | Query Range |
Subject Range |
|
|
349.0 | [0..7] | [391..136] |
|
Region A: Residues: [1-246] |
1 11 21 31 41 51
| | | | | |
1 MSSRYSERNG LSETEKMTLP KVRKRKAQLV DEIEALKNEV REVDEELDQV YYTHPKSKEY 60
61 HKIVVNGRKK FNQDPWKALD WLASRNVVAK DPQALALWMK AGEGLSKSAI GEILGDNRPF 120
121 ALETLDRFTK EHKLHDVPIV PALRQYLFSF RLPGESQKIN RILEKFAEVY ANQNPSYGNA 180
181 DQAHTVAYSC IMVNTLLHNP NVKDKPSLEK YIEMNEQLLE KGAITIEQLT EVYESVSVTQ 240
241 FKIPDE
|
| Detection Method: |  |
| Confidence: | 47.154902 |
| Match: | 1r8mE |
| Description: | SEC7 DOMAIN OF THE ARF EXCHANGE FACTOR ARNO WITH BREFELDIN A-SENSITIZING MUTATIONS |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ARF guanyl-nucleotide exchange factor activity | 3.21855719969171 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 2.34270596875878 | bayes_pls_golite062009 |
| GTPase regulator activity | 2.33775275044058 | bayes_pls_golite062009 |
| enzyme regulator activity | 2.18282128472415 | bayes_pls_golite062009 |
| guanyl-nucleotide exchange factor activity | 2.13694141859871 | bayes_pls_golite062009 |
| small GTPase regulator activity | 1.9528150458215 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.93411052758697 | bayes_pls_golite062009 |
| protein binding | 1.76037270569241 | bayes_pls_golite062009 |
| binding | 1.27080459409383 | bayes_pls_golite062009 |
| signal transducer activity | 0.329302915338046 | bayes_pls_golite062009 |
| molecular transducer activity | 0.329302915338046 | bayes_pls_golite062009 |
| phosphoinositide binding | 0.0750646331148792 | bayes_pls_golite062009 |
| phospholipid binding | 0.0172309833091902 | bayes_pls_golite062009 |
|
Region A: Residues: [247-393] |
1 11 21 31 41 51
| | | | | |
1 VSTSGKGTVN DILLHAEREG WLFKQSSNPL FSGALSWKKR WFVLSENCLY YFDQMTDKEP 60
61 KGIITLANVG IRKVEAPSRP FMFEIFSLSD GQIKACKTEQ DGRLVEGRHS IYKICAVNDE 120
121 DMRSWINAIS RMMAPQQHLL ARPKSTH
|
| Detection Method: | |
| Confidence: | 24.522879 |
| Match: | 1fhwA |
| Description: | Grp1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 3.17213698546013 | bayes_pls_golite062009 |
| actin binding | 3.00914116198279 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.67068028643471 | bayes_pls_golite062009 |
| binding | 2.65091781683225 | bayes_pls_golite062009 |
| profilin binding | 1.91751880819794 | bayes_pls_golite062009 |
| actin filament binding | 1.90278181549871 | bayes_pls_golite062009 |
| cell adhesion molecule binding | 1.3855488465667 | bayes_pls_golite062009 |
| transporter activity | 1.28986800087234 | bayes_pls_golite062009 |
| protein domain specific binding | 1.24896354314328 | bayes_pls_golite062009 |
| phospholipid binding | 1.09683218092034 | bayes_pls_golite062009 |
| receptor binding | 1.00859318603128 | bayes_pls_golite062009 |
| phosphoinositide binding | 0.71817045430443 | bayes_pls_golite062009 |
| signal transducer activity | 0.704817275989342 | bayes_pls_golite062009 |
| molecular transducer activity | 0.704817275989342 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.54401901869178 | bayes_pls_golite062009 |
| GTPase binding | 0.18593284596663 | bayes_pls_golite062009 |
| lipid binding | 0.179561240451969 | bayes_pls_golite062009 |
| protein complex binding | 0.15504114076075 | bayes_pls_golite062009 |
| small GTPase binding | 0.124515895045891 | bayes_pls_golite062009 |
