| Protein: | hmg-1.2 |
| Organism: | Caenorhabditis elegans |
| Length: | 235 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hmg-1.2.
| Description | E-value | Query Range |
Subject Range |
|
|
176.0 | [0..49] | [221..375] |
|
Region A: Residues: [1-235] |
1 11 21 31 41 51
| | | | | |
1 MNSGYSANIF PSSSSPTLYQ SHQLQPNPSA TMYQATPRDM GKPPVRGKTS PYGFFVKMCY 60
61 EEHKKKYPNE NVQVTEISKK CSEKWKTMVD DEKRRFYELA QKDAERYQAE VSVAAYGGED 120
121 AMRKRKRAKK DPHAPKRALS AFFFYSQDKR PEIQAGHPDW KVGQVAQELG KMWKLVPQET 180
181 KDMYEQKAQA DKDRYADEMR NYKAEMQKMS GMDHYDDDNI HHVVHVEDIN SQNIS
|
| Detection Method: |  |
| Confidence: | 29.0 |
| Match: | 2gzkA |
| Description: | No description for 2gzkA was found. |
| Term | Confidence | Notes |
| binding | 2.28152434895694 | bayes_pls_golite062009 |
| DNA binding | 1.84781463420276 | bayes_pls_golite062009 |
| nucleic acid binding | 1.65696822227413 | bayes_pls_golite062009 |
| transcription regulator activity | 1.61604561096523 | bayes_pls_golite062009 |
| beta-catenin binding | 1.41213253616358 | bayes_pls_golite062009 |
| transcription factor activity | 0.79924481726919 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.61748685686195 | bayes_pls_golite062009 |
| protein binding | 0.413179898438205 | bayes_pls_golite062009 |
