| Protein: | fbl-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 689 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fbl-1.
| Description | E-value | Query Range |
Subject Range |
|
|
376.0 | [0..6] | [603..2016] |
|
Region A: Residues: [1-136] |
1 11 21 31 41 51
| | | | | |
1 MRICFLLLAF LVAETFANEL TRCCAGGTRH FKNSNTCSSI KSEGTSMTCQ RAASICCLRS 60
61 LLDNACDSGT DIAKEEESCP SNINILGGGL KKECCDCCLL AKDLLNRNEP CVAPVGFSAG 120
121 CLRSFNKCCN GDIEIT
|
| Detection Method: |  |
| Confidence: | 4.221849 |
| Match: | 2dtgE |
| Description: | No description for 2dtgE was found. |
|
Region A: Residues: [137-525] |
1 11 21 31 41 51
| | | | | |
1 HASEIITGRP LNDPHVLHLG DRCASSHCEH LCHDRGGEKV ECSCRSGFDL APDGMACVDI 60
61 DECATLMDDC LESQRCLNTP GSFKCIRTLS CGTGYAMDSE TERCRDVDEC NLGSHDCGPL 120
121 YQCRNTQGSY RCDAKKCGDG ELQNPMTGEC TSITCPNGYY PKNGMCNDID ECVTGHNCGA 180
181 GEECVNTPGS FRCQQKGNLC AHGYEVNGAT GFCEDVNECQ QGVCGSMECI NLPGTYKCKC 240
241 GPGYEFNDAK KRCEDVDECI KFAGHVCDLS AECINTIGSF ECKCKPGFQL ASDGRRCEDV 300
301 NECTTGIAAC EQKCVNIPGS YQCICDRGFA LGPDGTKCED IDECSIWAGS GNDLCMGGCI 360
361 NTKGSYLCQC PPGYKIQPDG RTCVDVDEC
|
| Detection Method: | |
| Confidence: | 16.69897 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor binding | 4.33045214660893 | bayes_pls_golite062009 |
| extracellular matrix structural constituent | 3.98005075037205 | bayes_pls_golite062009 |
| growth factor activity | 3.53240291240997 | bayes_pls_golite062009 |
| protein binding | 3.02592228806142 | bayes_pls_golite062009 |
| ErbB-2 class receptor binding | 2.42443754640644 | bayes_pls_golite062009 |
| binding | 2.33940742543305 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 2.04860930279383 | bayes_pls_golite062009 |
| ErbB-3 class receptor binding | 1.94863441611642 | bayes_pls_golite062009 |
| heparin binding | 1.68224847671034 | bayes_pls_golite062009 |
| polysaccharide binding | 1.52943230565474 | bayes_pls_golite062009 |
| pattern binding | 1.40261567769805 | bayes_pls_golite062009 |
| epidermal growth factor receptor binding | 1.07113751916821 | bayes_pls_golite062009 |
| carbohydrate binding | 0.37481112933019 | bayes_pls_golite062009 |
| transcription regulator activity | 0.282532662545359 | bayes_pls_golite062009 |
| transcription factor binding | 0.25804698792789 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.154111600670615 | bayes_pls_golite062009 |
|
Region A: Residues: [526-689] |
1 11 21 31 41 51
| | | | | |
1 AMGECAGSDK VCVNTLGSFK CHSIDCPTNY IHDSLNKNQI ADGYSCIKVC STEDTECLGN 60
61 HTREVLYQFR AVPSLKTIIS PIEVSRIVTH MGVPFSVDYN LDYVGQRHFR IVQERNIGIV 120
121 QLVKPISGPT VETIKVNIHT KSRTGVILAF NEAIIEISVS KYPF
|
| Detection Method: | |
| Confidence: | 2.86 |
| Match: | 1autL |
| Description: | Activated protein c (autoprothrombin IIa) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor binding | 3.99541876330624 | bayes_pls_golite062009 |
| extracellular matrix structural constituent | 3.85002956705444 | bayes_pls_golite062009 |
| growth factor activity | 3.14258960655219 | bayes_pls_golite062009 |
| protein binding | 2.87649191391668 | bayes_pls_golite062009 |
| binding | 2.2422088916225 | bayes_pls_golite062009 |
| ErbB-2 class receptor binding | 1.82603324813818 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 1.79528213050973 | bayes_pls_golite062009 |
| heparin binding | 1.40326733979777 | bayes_pls_golite062009 |
| ErbB-3 class receptor binding | 1.3789475655616 | bayes_pls_golite062009 |
| polysaccharide binding | 1.29534342979498 | bayes_pls_golite062009 |
| pattern binding | 1.18858604250595 | bayes_pls_golite062009 |
| epidermal growth factor receptor binding | 0.551960624416828 | bayes_pls_golite062009 |
| carbohydrate binding | 0.221914592276874 | bayes_pls_golite062009 |
| transcription regulator activity | 0.212747699806043 | bayes_pls_golite062009 |
| transcription factor binding | 0.031856897261354 | bayes_pls_golite062009 |
