YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ech-7
Organism: Caenorhabditis elegans
Length: 256 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ech-7.

Description E-value Query
Range
Subject
Range
gi|241218800, gi... - gi|241769557|ref|ZP_04766976.1| Enoyl-CoA hydratase/isomerase [Sulfolobus solfataricus 98/2], gi|241...
gi|25291790 - pir||A90436 enoyl CoA hydratase (paaF-7) [imported] - Sulfolobus solfataricus
gi|13815932, gi|... - gi|15899349|ref|NP_343954.1| enoyl CoA hydratase (paaF-7) [Sulfolobus solfataricus P2], gi|13815932|...
302.0 [0..1] [255..8]

Back

Predicted Domain #1
Region A:
Residues: [1-256]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITLSRTGAA ENVALITLNR PSALNALCRE LMLELSENLL KVEKDQSYHV IVLTGSEKAF  60
   61 AAGADIKEMA KLEFADVFEN DYFTNWDTLS HITKPVIAAV NGFALGGGTE LALMCDIVYA 120
  121 GENAIFGQPE ITIGTIPGLG GTQRWPRYVS KSVAMEICLS GDRLGAQEAK EDGLVSKVFP 180
  181 VQQLVGEAVL LADRIAKNSP LIVKTVKRSL NSAYQTSLNQ GLEMEKQLFQ STFATNDRRE 240
  241 GMSAFAEKRA PKWTSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 77.221849
Match: 1ey3A
Description: Enoyl-CoA hydratase (crotonase)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
long-chain-3-hydroxyacyl-CoA dehydrogenase activity 5.99914207874933 bayes_pls_golite062009
long-chain-enoyl-CoA hydratase activity 5.38361434383109 bayes_pls_golite062009
enoyl-CoA hydratase activity 3.92947460544831 bayes_pls_golite062009
CoA carboxylase activity 3.89913842968597 bayes_pls_golite062009
acetyl-CoA carboxylase activity 3.85567083340773 bayes_pls_golite062009
acetyl-CoA C-acyltransferase activity 3.6090947563188 bayes_pls_golite062009
ligase activity, forming carbon-carbon bonds 3.4980371783229 bayes_pls_golite062009
3-hydroxyacyl-CoA dehydrogenase activity 2.44182589784656 bayes_pls_golite062009
dodecenoyl-CoA delta-isomerase activity 1.80820904754223 bayes_pls_golite062009
catalytic activity 1.46154163027498 bayes_pls_golite062009
propionyl-CoA carboxylase activity 1.20853698666984 bayes_pls_golite062009
ligase activity 0.98581896521131 bayes_pls_golite062009
binding 0.578223105269736 bayes_pls_golite062009
3-hydroxybutyryl-CoA epimerase activity 0.241955774397835 bayes_pls_golite062009
racemase and epimerase activity, acting on hydroxy acids and derivatives 0.099208209617217 bayes_pls_golite062009
intramolecular oxidoreductase activity, transposing C=C bonds 0.0918189681606029 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle