| Protein: | mig-5 |
| Organism: | Caenorhabditis elegans |
| Length: | 666 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mig-5.
| Description | E-value | Query Range |
Subject Range |
|
|
431.0 | [0..1] | [666..1] |
|
Region A: Residues: [1-91] |
1 11 21 31 41 51
| | | | | |
1 MEPPCTSDCS QIKVFYYLDD ETTPYVSVIE AREGVATLGN FKNSFTKRGY KYYAKELDPD 60
61 IQREVKVELT TDSDRLRKSQ NGFYEIFLVS T
|
| Detection Method: |  |
| Confidence: | 8.0 |
| Match: | 1wspA |
| Description: | Crystal structure of axin dix domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [92-406] |
1 11 21 31 41 51
| | | | | |
1 PGYGTLPRNS GTMTRPQRTA LDKRRRRSAD FDATPYSDAS LAPSTIVSRR AGEHLAELYT 60
61 SNSEDPYQYD EHTRRTGDDS SLYEPLAARD MNKIYDDDRR RKKQKKERFR RPYVPSTISS 120
121 ATESSVNSGL PRILEIYLPM KNVPYLGLSV CTIDGHIFVS EIAPEGAVEK DGRVNVGDQI 180
181 LQVNRVSFEE LSGPQAVRSL REAASSKRPI TLYISKFARG APSEYDDPLA SMASETMPLD 240
241 VGVWVETAVQ NTEKMKALGL DPQEQTATTI DDGTLPFTST ASDDEERMLY DQRRNGIPRA 300
301 LIEEAERKRE NEQNE
|
| Detection Method: | |
| Confidence: | 22.522879 |
| Match: | 1z87A |
| Description: | solution structure of the split PH-PDZ Supramodule of alpha-Syntrophin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [407-510] |
1 11 21 31 41 51
| | | | | |
1 KIEQLTEMID PIIVVRSMAR PDSGLAVKNR KWLKILVPMS FIGRDLVDWL VDHMADIHNR 60
61 KKARIYAARL LAAGLIRHVV SKLTFTEKCY YVFGDGILGN DRNS
|
| Detection Method: | |
| Confidence: | 16.0 |
| Match: | 1fshA |
| Description: | Segment polarity protein Dishevelled-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 2.04426015975991 | bayes_pls_golite062009 |
| binding | 1.99063774159045 | bayes_pls_golite062009 |
| DNA binding | 1.63968725174405 | bayes_pls_golite062009 |
| nucleic acid binding | 1.51035375793093 | bayes_pls_golite062009 |
| transcription factor activity | 1.16072080355661 | bayes_pls_golite062009 |
| transcription activator activity | 0.14130464856269 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.13573040816325 | bayes_pls_golite062009 |
|
Region A: Residues: [511-666] |
1 11 21 31 41 51
| | | | | |
1 TDTTGTSGTT MRVEATTEVT YVGSPAPHAL AARVGRNIPH RLETTTLSPV AHDQTWLRRR 60
61 RDCESPMTND YASMVGESQI GMNPVGNYHV FGTKNNHRQV PAPSQVTSSS LTNVTNSRKW 120
121 WLRRPSADSS IQYYGSSSFS DSVAERSQPR FRRGEQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
