| Protein: | CE24890 |
| Organism: | Caenorhabditis elegans |
| Length: | 392 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE24890.
| Description | E-value | Query Range |
Subject Range |
|
|
460.0 | [0..33] | [392..58] |
|
Region A: Residues: [1-138] |
1 11 21 31 41 51
| | | | | |
1 MLRIVLARSS RAMSSASPAS ASDSDTSVRK IGKALETYLK HSQQHVAMME KHRAEFETGR 60
61 RHLAKMMSLD IHELDQEAID RAILYLFPSG LTDPNARPVM RPPDEILPKF QRFTFDEEGK 120
121 PEGSRFFTLS PKIYGLLS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [139-245] |
1 11 21 31 41 51
| | | | | |
1 DIGVKTHSVM KFYDEHVGSR SVNRSDLEPA NLSGSQWVTA DKLKKKLSEK FSKELYGQVI 60
61 IAFEHLASLP GSAIEQKFLM EFREPMTAST GSKLFGPAIP EVHVCAV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [246-392] |
1 11 21 31 41 51
| | | | | |
1 TNRRYAEVTT RCKDTRATVK VTDAGKGKFD IDGLQLHDFR HLQAREILLA PMIVSQSLGR 60
61 FDVTATTSCI SNTLPEAPNK APLMRSGGMS ALPRAVRHGT ALCVAALQPE AIEPLRLSGL 120
121 LTLDPRKNER SKVNQPGARA KWIWKRR
|
| Detection Method: | |
| Confidence: | 41.522879 |
| Match: | 1vs5I |
| Description: | No description for 1vs5I was found. |
| Term | Confidence | Notes |
| structural constituent of ribosome | 7.32829196949019 | bayes_pls_golite062009 |
| structural molecule activity | 6.75880680396215 | bayes_pls_golite062009 |
| RNA binding | 1.40868766468494 | bayes_pls_golite062009 |
| catalytic activity | 0.878454819018611 | bayes_pls_golite062009 |
| binding | 0.872512498570204 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 0.63084241316774 | bayes_pls_golite062009 |
| nucleic acid binding | 0.555181608481691 | bayes_pls_golite062009 |
| exonuclease activity | 0.48372105698577 | bayes_pls_golite062009 |
| transcription regulator activity | 0.368412900600617 | bayes_pls_golite062009 |
| ribonuclease activity | 0.19921800066954 | bayes_pls_golite062009 |
| protein binding | 0.0913090112555771 | bayes_pls_golite062009 |
| DNA binding | 0.0880977286684361 | bayes_pls_golite062009 |
| mRNA binding | 0.0491645692672305 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 6.9430052008157E-5 | bayes_pls_golite062009 |
