| Protein: | efl-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 412 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for efl-2.
| Description | E-value | Query Range |
Subject Range |
|
|
354.0 | [0..1] | [412..59] |
|
Region A: Residues: [1-102] |
1 11 21 31 41 51
| | | | | |
1 MDPSSIDLGS IPGGSEQQQH EDGAAAAAGS PKEVFRSQQS LGLITQRFMS LRQRNEVLNL 60
61 NEVAKELNIS KRRVYDVINV LEGLGYVEKV EKNNIRWIGD NN
|
| Detection Method: |  |
| Confidence: | 25.0 |
| Match: | 1cf7A |
| Description: | Cell cycle transcription factor E2F-4 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 2.04426015975991 | bayes_pls_golite062009 |
| binding | 1.99063774159045 | bayes_pls_golite062009 |
| DNA binding | 1.63968725174405 | bayes_pls_golite062009 |
| nucleic acid binding | 1.51035375793093 | bayes_pls_golite062009 |
| transcription factor activity | 1.16072080355661 | bayes_pls_golite062009 |
| transcription repressor activity | 0.55739080981393 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.17466804820317 | bayes_pls_golite062009 |
|
Region A: Residues: [103-317] |
1 11 21 31 41 51
| | | | | |
1 NSEEQNALEA RVEMLRQQEK LLELMIRDAQ AIIELHFEDP IERPYNYVSK EDIRKTAEPN 60
61 TKSIIVKSEL DTSSSFEIQV TDPSTSGSHD MIVRNKNGVK SHALLFTNDP PEYGDEEDED 120
121 DVKKLSSQKR FETSEALRVT LAEMLTDPTT ISSSPKHIKL EEPEEIDTED LETFAPPEFS 180
181 ENKWSQKIGG GLAILWAWLA LMPRPQNGNF FSAKF
|
| Detection Method: | |
| Confidence: | 24.69897 |
| Match: | 2azeA |
| Description: | Structure of the Rb C-terminal domain bound to an E2F1-DP1 heterodimer |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [318-412] |
1 11 21 31 41 51
| | | | | |
1 FKFFPETVAR KTFVLPPSTS ASQSNAPYLP ETPGRGLFFS PFKSLIDPCI LPSFSDDLTS 60
61 GYINITTPSR ATGAGAGASG QEDEEPVSVM DFFSD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
