| Protein: | CE23238 |
| Organism: | Caenorhabditis elegans |
| Length: | 660 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE23238.
| Description | E-value | Query Range |
Subject Range |
|
|
472.0 | [0..7] | [658..154] |
|
Region A: Residues: [1-409] |
1 11 21 31 41 51
| | | | | |
1 MGLGRVITRS LSSVEPALSQ KLTIQPAIER SPTDLLNALS ETVGPDTTAP HFAYIDDPIT 60
61 IPSTQSTKKT YFMAKEFGKR AARELATEWP TLFAFDRDQP QLPVFRPRHL ADPLQVEPTE 120
121 NNLLKMISSR EVKDSCILYE RMRSENVDVS EKVQLELFRL VTYYNSSNVP FAEWEEFVGM 180
181 RNFGEDSTSS WKSGAVADLL FETLPKTDET VSIMIAGLCK FSDHSSLERA RELYKEHRAA 240
241 KGKVYREAFN GLIGASSYSV GKKLVAEMIS LRMTPDIFTF NALLSSAAKA GKFEDRVKAF 300
301 TEIIGEMKEI GVEPALSSFH LIIKNIIDFK LLDNEKRESD EQKKTYNHQL TVAISWLNEI 360
361 QNSLTGKTLK PITSTCNLFF VEAMGIHYRA ANENLAENLV SIYESKANE
|
| Detection Method: |  |
| Confidence: | 12.0 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.18163947675357 | bayes_pls_golite062009 |
| protein binding | 0.80959862334949 | bayes_pls_golite062009 |
|
Region A: Residues: [410-511] |
1 11 21 31 41 51
| | | | | |
1 VKMPAFTIES MFYNRQLQLA VEQSASLNRI YDLYTTMVPR LVGVNNYLSS LVFRKLAASS 60
61 DRHWPLLRRV IIDGIAAGQM NGVIGEEMRK QLCNVQLHTL GT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [512-660] |
1 11 21 31 41 51
| | | | | |
1 SEREQFTSLV QKLVAVWVEF SQFTEERMRR LQRKLSPSQI SECALLLTRI GEQQKAYELL 60
61 DLLLDETASS GDEATVYPRG HARPWAMAEL FEDALRKRDT YAAATCLQIM SLTANRAKLE 120
121 PLANRIFEKC NVNQEQVRII QGFIRLRPQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
