| Protein: | clec-73 |
| Organism: | Caenorhabditis elegans |
| Length: | 577 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for clec-73.
| Description | E-value | Query Range |
Subject Range |
|
|
335.0 | [0..1] | [577..1] |
|
Region A: Residues: [1-91] |
1 11 21 31 41 51
| | | | | |
1 MTTKVVSVWL GFIVSAFFTT SWGLLLNSDE GFEKACKQSG GDYTQRAGND SNTGDICLMT 60
61 FQAVATDMDA ARDFCNIKAP WRLREAKIDK S
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [92-280] |
1 11 21 31 41 51
| | | | | |
1 QDSIPVIICD VEATFTCNAG WIQMFGYCFK MSEVHDRYTR EKAEQYCKDQ AGPSFQGEIA 60
61 GIHHRYILTP WRSYFTRLQQ FWIRAPETWD EYVIKTDKVD GDNLALSFYD VHPDFSVPQN 120
121 AMIKINGKVE LQALCQYKPA ITPAEINYMG RRYSEIYYPT VPVKDGIIVR SASSYTRSSN 180
181 QSDVCKKVL
|
| Detection Method: | |
| Confidence: | 19.39794 |
| Match: | 1tdqB |
| Description: | Structural basis for the interactions between tenascins and the C-type lectin domains from lecticans: evidence for a cross-linking role for tenascins |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.13629480035749 | bayes_pls_golite062009 |
| carbohydrate binding | 0.44675717945952 | bayes_pls_golite062009 |
| protein binding | 0.059857076934361 | bayes_pls_golite062009 |
|
Region A: Residues: [281-400] |
1 11 21 31 41 51
| | | | | |
1 KPYMYSKESQ FFPDPDSMEQ LAKLEPEAYS LMRSPLVSNS VERYRTNRYC QAPSNPHYEV 60
61 VLGGKKTANF VVEENKIKGK PTCDNMMSVS ISHFKGQAPE FHPMVDSQSL PIWCKLGKVV 120
121
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [401-577] |
1 11 21 31 41 51
| | | | | |
1 KYKYKVTPGW TDFRRLNGQV ALHWLSKDKL TFADAAAACE AKGANLAGIN SLKEAEQLGN 60
61 HVVGANLNNE QFWLGAQRRT ECLENNDWKP PCTRDKIFEW MNNVATDFRS EWWKKNNNLH 120
121 SPNPSGTGQR CLSFAFGDLW WSYKGHTGFL DDIECHTELR YFCSKMAPFT ECEENCD
|
| Detection Method: | |
| Confidence: | 20.39794 |
| Match: | 1sl6A |
| Description: | Crystal Structure of a fragment of DC-SIGNR (containg the carbohydrate recognition domain and two repeats of the neck) complexed with Lewis-x. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.13629480035749 | bayes_pls_golite062009 |
| carbohydrate binding | 0.44675717945952 | bayes_pls_golite062009 |
| protein binding | 0.059857076934361 | bayes_pls_golite062009 |
