| Protein: | mys-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 458 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mys-1.
| Description | E-value | Query Range |
Subject Range |
|
|
480.0 | [0..9] | [452..14] |
|
Region A: Residues: [1-161] |
1 11 21 31 41 51
| | | | | |
1 MTEPKKEIIE DENHGISKKI PTDPRQYEKV TEGCRLLVMM ASQEEERWAE VISRCRAANG 60
61 SIKFYVHYID CNRRLDEWVQ SDRLNLASCE LPKKGGKKGA HLREENRDSN ENEGKKSGRK 120
121 RKIPLLPMDD LKAESVDPLQ AISTMTSGST PSLRGSMSMV G
|
| Detection Method: |  |
| Confidence: | 15.39794 |
| Match: | 1wgsA |
| Description: | Solution Structure of the Tudor Domain from Mouse Hypothetical Protein Homologous to Histone Acetyltransferase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription repressor activity | 4.08500855631983 | bayes_pls_golite062009 |
| chromatin binding | 3.84065302930105 | bayes_pls_golite062009 |
| transcription regulator activity | 3.64390820819794 | bayes_pls_golite062009 |
| methylated histone residue binding | 3.42338304360938 | bayes_pls_golite062009 |
| binding | 3.06758476214113 | bayes_pls_golite062009 |
| protein binding | 2.66728689880621 | bayes_pls_golite062009 |
| transcription elongation regulator activity | 2.46353586381231 | bayes_pls_golite062009 |
| nucleic acid binding | 2.19167058827256 | bayes_pls_golite062009 |
| DNA binding | 2.05514577638135 | bayes_pls_golite062009 |
| histone binding | 2.00388175060339 | bayes_pls_golite062009 |
| transcription activator activity | 1.46529895769882 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.10020047862576 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.998957812785999 | bayes_pls_golite062009 |
| general transcriptional repressor activity | 0.75184432495983 | bayes_pls_golite062009 |
| DNA helicase activity | 0.726970683178132 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 0.494788451379878 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.294457188332415 | bayes_pls_golite062009 |
| catalytic activity | 0.14067200158938 | bayes_pls_golite062009 |
|
Region A: Residues: [162-458] |
1 11 21 31 41 51
| | | | | |
1 HSEDAMTRIR NVECIELGRS RIQPWYFAPY PQQLTSLDCI YICEFCLKYL KSKTCLKRHM 60
61 EKCAMCHPPG NQIYSHDKLS FFEIDGRKNK SYAQNLCLLA KLFLDHKTLY YDTDPFLFYV 120
121 LTEEDEKGHH IVGYFSKEKE SAEEYNVACI LVLPPFQKKG YGSLLIEFSY ELSKIEQKTG 180
181 SPEKPLSDLG LLSYRSYWSM AIMKELFAFK RRHPGEDITV QDISQSTSIK REDVVSTLQQ 240
241 LDLYKYYKGS YIIVISDEKR QVYEKRIEAA KKKTRINPAA LQWRPKEYGK KRAQIMF
|
| Detection Method: | |
| Confidence: | 107.0 |
| Match: | 2ou2A |
| Description: | No description for 2ou2A was found. |
