| Protein: | tdc-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 650 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tdc-1.
| Description | E-value | Query Range |
Subject Range |
|
|
492.0 | [0..1] | [623..1] |
|
Region A: Residues: [1-557] |
1 11 21 31 41 51
| | | | | |
1 MVYGLGEALK NLNSYCQERT TRIRNSLSPS RPSMSEATAT GSSSSSRAST TIPSTPNMDV 60
61 TPTVEDPRQN DNNASGMTRD EFRQYGKETV DYIVDYLENI QKRRVVPAIE PGYLKDLIPS 120
121 EAPNTPESFE SVMEDFEKLI MPGITHWQHP RFHAYFPAGN SFPSIIADML SDAIGCVGFS 180
181 WAACPAMTEL ELIMLDWFGK MIGLPAEFLP LTENGKGGGV IQSSASECNF VTLLAARFEV 240
241 MKELRQRFPF VEEGLLLSKL IAYCSKEAHS SVEKACMIGM VKLRILETDS KFRLRGDTLR 300
301 NAIQEDRNLG LIPFFVSTTL GTTSCCSFDV LSEIGPICKE NELWLHVDAA YSGSAFICPE 360
361 FRPLMNGIEY AMSFNTNPNK WLLINFDCST MWVRDRFKLT QALVVDPLYL QHSWMDKSID 420
421 YRHWGIPLSR RFRSLKLWFV IRMYGIDGLQ KYIREHVRLA KKMETLLRAD AKFEIVNEVI 480
481 MGLVCFRMKG DDELNQTLLT RLNASGRIHM VPASLGDRFV IRFCVCAENA TDKDIEVAYE 540
541 IIAQATQHVL HDSVKAV
|
| Detection Method: |  |
| Confidence: | 110.0 |
| Match: | 1js3A |
| Description: | DOPA decarboxylase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| 4-aminobutyrate transaminase activity | 2.49533238079952 | bayes_pls_golite062009 |
| catalytic activity | 2.29878871754893 | bayes_pls_golite062009 |
| transferase activity, transferring nitrogenous groups | 1.28316822767388 | bayes_pls_golite062009 |
| transaminase activity | 1.24990480711889 | bayes_pls_golite062009 |
| 5-aminolevulinate synthase activity | 1.01853440922526 | bayes_pls_golite062009 |
| transferase activity | 0.737426388870721 | bayes_pls_golite062009 |
| binding | 0.252160165096264 | bayes_pls_golite062009 |
| L-aspartate:2-oxoglutarate aminotransferase activity | 0.130698724135981 | bayes_pls_golite062009 |
| carbon-carbon lyase activity | 0.11598778799668 | bayes_pls_golite062009 |
| aromatic-L-amino-acid decarboxylase activity | 0.10589462882093 | bayes_pls_golite062009 |
|
Region A: Residues: [558-650] |
1 11 21 31 41 51
| | | | | |
1 IAEEDEEAVA LEEMVADLNI TETPEKCLTR QNSANAAESG QKLERQLSKE EILAQKQHES 60
61 LAKKRYTPQP LDLALAPDSD PELSPCSPQI LVS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
