| Protein: | CE20700 |
| Organism: | Caenorhabditis elegans |
| Length: | 555 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE20700.
| Description | E-value | Query Range |
Subject Range |
|
|
439.0 | [0..7] | [554..46] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MVAEKRDANV AASKGDANRK SVKIEDCPTY SHSSGSSVNE MVNQSGGDSE DSTSPRAAGC 60
61 RTRRRTMSGG RAEHHLLTTK TGKKIYTKGR PPWYDKKGKS LKH
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [104-330] |
1 11 21 31 41 51
| | | | | |
1 PFVIGVCGGS ASGKTTVAEK IVERLGIPWV TILSMDSFYK VLTPEEIKAA HESRYNFDGP 60
61 NAFDFDLLYE VLKRLREGKS VDVPVYDFNT HSRDPNSKMM YGADVLIFEG ILAFHDERIK 120
121 NLMDMKVFVD TDGDLRLARR IVRDVTDRGR DIDGIMEQYF TFVKPAFDKY IAPCMDSADL 180
181 IVPRGGENDV AIDMIVQNVM AQLVERGYDR NQNNRDRHDL VRDDLPD
|
| Detection Method: | |
| Confidence: | 45.0 |
| Match: | 1xrjA |
| Description: | Rapid structure determination of human uridine-cytidine kinase 2 using a conventional laboratory X-ray source and a single samarium derivative |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleobase, nucleoside, nucleotide kinase activity | 3.66392587433723 | bayes_pls_golite062009 |
| nucleotide kinase activity | 2.24094813695083 | bayes_pls_golite062009 |
| kinase activity | 2.0779386406753 | bayes_pls_golite062009 |
| binding | 2.05253348982328 | bayes_pls_golite062009 |
| phosphotransferase activity, phosphate group as acceptor | 1.96697952975573 | bayes_pls_golite062009 |
| nucleic acid binding | 1.60768715809391 | bayes_pls_golite062009 |
| DNA binding | 1.11699929651302 | bayes_pls_golite062009 |
| RNA helicase activity | 1.02424782546779 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| transcription regulator activity | 0.989226939888218 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 0.95986988363392 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 0.94128341275411 | bayes_pls_golite062009 |
| hydrolase activity | 0.533811513387322 | bayes_pls_golite062009 |
| adenylate kinase activity | 0.447752711852745 | bayes_pls_golite062009 |
| protein binding | 0.193768631623192 | bayes_pls_golite062009 |
| nucleotide binding | 0.114848452385726 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.10713474095071 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.0916519414118148 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.0915913646217636 | bayes_pls_golite062009 |
| helicase activity | 0.0775311459068899 | bayes_pls_golite062009 |
| transcription factor activity | 0.0434163635422169 | bayes_pls_golite062009 |
|
Region A: Residues: [331-555] |
1 11 21 31 41 51
| | | | | |
1 CLPENLFILK ETPQVKGLVT FVRDRETSRD NHIFYSDRLM RILIEECMNH MPYKDVEIEM 60
61 AGGRKTIGKR KDAQICGLPI MRAGECMETA LRSIVKDCVI GKILIQTNET TFDPELHYIR 120
121 LPPHITRYKV IIMDATVTTG SAAMMAIRVL LDHDVKEEDI FVASLLMGQQ GAHALAYAFP 180
181 KVKLITTAMD HQMTENCYLI PGMGNFGDRY YGTGLEQDMD EPFDM
|
| Detection Method: | |
| Confidence: | 57.30103 |
| Match: | 1bd3D |
| Description: | Uracil PRTase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| uracil phosphoribosyltransferase activity | 3.97944228585882 | bayes_pls_golite062009 |
| transferase activity, transferring glycosyl groups | 3.91023158228049 | bayes_pls_golite062009 |
| adenine phosphoribosyltransferase activity | 3.07502596276449 | bayes_pls_golite062009 |
| hypoxanthine phosphoribosyltransferase activity | 2.97347277288245 | bayes_pls_golite062009 |
| transferase activity | 2.73727660668741 | bayes_pls_golite062009 |
| transferase activity, transferring pentosyl groups | 2.53679639481311 | bayes_pls_golite062009 |
| catalytic activity | 2.30431811394775 | bayes_pls_golite062009 |
| nucleobase binding | 1.70525606708275 | bayes_pls_golite062009 |
| purine binding | 1.24786927434743 | bayes_pls_golite062009 |
| transcription regulator activity | 1.09798789282825 | bayes_pls_golite062009 |
| nucleic acid binding | 1.07284130528063 | bayes_pls_golite062009 |
| ribose phosphate diphosphokinase activity | 0.947697983706416 | bayes_pls_golite062009 |
| DNA binding | 0.854593555814443 | bayes_pls_golite062009 |
| diphosphotransferase activity | 0.749909396904601 | bayes_pls_golite062009 |
| binding | 0.691442295634288 | bayes_pls_golite062009 |
| amidophosphoribosyltransferase activity | 0.360901350940423 | bayes_pls_golite062009 |
| transcription factor activity | 0.339219342075596 | bayes_pls_golite062009 |
| orotate phosphoribosyltransferase activity | 0.148898393751978 | bayes_pls_golite062009 |
