| Protein: | lin-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 436 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
|
Region A: Residues: [1-185] |
1 11 21 31 41 51
| | | | | |
1 MRKMLLFCIL LLFMPQFTES CLPSWFRQER SAPEQLQSAE NAAENSGSVP PDTSRNSLET 60
61 NEIGDAPSST STPETPTETT ISEAGDDEKR TEEVAKELIE KEAEYEGEYE DEKVDEEVEE 120
121 ALKYNEDATQ DATSTLKPAV RKEIEKLKEA KCKDYCHHNA TCHVEVIFRE DRVSAVVPSC 180
181 HCPQG
|
| Detection Method: |  |
| Confidence: | 0.996 |
| Match: | 1wheA |
| Description: | COAGULATION FACTOR, NMR, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| epidermal growth factor receptor binding | 4.08248920636506 | bayes_pls_golite062009 |
| receptor binding | 2.76510818289785 | bayes_pls_golite062009 |
| ErbB-2 class receptor binding | 1.90147602324004 | bayes_pls_golite062009 |
| ErbB-3 class receptor binding | 1.85625693531369 | bayes_pls_golite062009 |
| signal transducer activity | 1.66370136016696 | bayes_pls_golite062009 |
| molecular transducer activity | 1.66370136016696 | bayes_pls_golite062009 |
| binding | 1.62855234773036 | bayes_pls_golite062009 |
| growth factor activity | 1.47902993477961 | bayes_pls_golite062009 |
| transcription factor binding | 0.568897560911761 | bayes_pls_golite062009 |
| protein binding | 0.448653666571103 | bayes_pls_golite062009 |
|
Region A: Residues: [186-436] |
1 11 21 31 41 51
| | | | | |
1 WEGTRCDRHY VQAFYAPING RYNVRLSTMS STAQLLVQQS STSAIPAFAF LIVMLIMFIT 60
61 IVVYAYRRMS KRSDDMTYTM SHMCPPEAFN VLKTPNGRHI PVHQIPSCSY TIPTPGTVPP 120
121 NISSTPGSRI PTRQQAIRNN EQARNNFFSI LRSQGTIPSR SINDDDTPKH YKSVPRVEVS 180
181 AINYSGHIDF STVSYQSTES EVSKASVTCP PPAHTVINIE LDSADTNFRS PSRSSGEQGS 240
241 PATCEPMIRH T
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
