| Protein: | ers-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 786 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ers-1.
| Description | E-value | Query Range |
Subject Range |
|
|
839.0 | [0..1] | [783..1] |
|
Region A: Residues: [1-155] |
1 11 21 31 41 51
| | | | | |
1 MATKEELLSL GLSDSKVAET LKNVKLTETI GSIVKLASES GEISKQKGTL LYQLATKLKP 60
61 QVAAHTPLVV KYIMNDGIKT EPQLSAAIEY LLSHTVKGIQ VPDFEKSCGV GVVVTIDDIE 120
121 AAVTKVIGQH REKIVAERYS FPAGKLLGEL RALLP
|
| Detection Method: |  |
| Confidence: | 82.638272 |
| Match: | PF04558.6 |
| Description: | No description for PF04558.6 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [156-248] |
1 11 21 31 41 51
| | | | | |
1 WADGAITKKE VDLRFLELLG PKTAEDLAPK KKEKKPEGPK PSKDAAAAAT APGTKNQKEA 60
61 SPEEFADGAE TMDELLRTRA HFHKVGENFK QDG
|
| Detection Method: | |
| Confidence: | 4.154902 |
| Match: | 1iq0A |
| Description: | Arginyl-tRNA synthetase (ArgRS); Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [249-786] |
1 11 21 31 41 51
| | | | | |
1 YVTTPKTAEL LKAHVAAVGG KVVTRFPPEP NGVLHIGHAK AININFGYAK AMGGVCNLRF 60
61 DDTNPEKEEE KFFSAIEDIV HWLGYDPARV THSSDNFQQL YLWAVKLIQK GLAFVCHQKV 120
121 EEMRGFEVQL SPWRERPIEE NIQLFEDMKN GKFDEGEATL RLKLTLEEGK VDPVAYRIKY 180
181 VPHHRTGNQW CIYPTYDYTH CLCDSIENIT HSLCTKEFQS RRSSYYWLCN ALDIYCPVQW 240
241 EYGRLNVNYT VVSKRKILKL ITTKTVNDWD DPRLFTLTAL RRRGIPSEAI NRFVAKLGLT 300
301 MSQMVIDPHV LDATVRDYLN IHAPRTMAVL EGLKLTIENF SELNLPSSVD VPDFPSDPTD 360
361 PRKHSVSVDR EIFIEKSDYK PDDSDKSFRR LTPKQAVGLK HIGLVLRFVK EVKDAEGHVT 420
421 EVVVKAEKLS EKDKPKAFIH WVAKPVSCEV RLYDRLFKSK NPEDAQLVPG GFLSDINPDS 480
481 LTVVYNALID QSIAKSKVYD RFQFERIGFF CVDRDSTSST LVFNRTVMLK DGGASGKN
|
| Detection Method: | |
| Confidence: | 162.0 |
| Match: | 1o0bA |
| Description: | Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain; Glutaminyl-tRNA synthetase (GlnRS) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| glutamine-tRNA ligase activity | 7.66556935228325 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.16276509815667 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 7.16276509815667 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.13957775963187 | bayes_pls_golite062009 |
| ligase activity | 6.11211476973434 | bayes_pls_golite062009 |
| lysine-tRNA ligase activity | 4.64665624411373 | bayes_pls_golite062009 |
| structural constituent of ribosome | 4.61484562096458 | bayes_pls_golite062009 |
| structural molecule activity | 4.261982318682 | bayes_pls_golite062009 |
| glutamate-tRNA ligase activity | 2.63681738794687 | bayes_pls_golite062009 |
| catalytic activity | 2.37674226834122 | bayes_pls_golite062009 |
| 5S rRNA binding | 2.25646775578129 | bayes_pls_golite062009 |
| rRNA binding | 2.12571610259264 | bayes_pls_golite062009 |
| methionine-tRNA ligase activity | 2.01261843164558 | bayes_pls_golite062009 |
| tyrosine-tRNA ligase activity | 1.88984817882585 | bayes_pls_golite062009 |
| tryptophan-tRNA ligase activity | 1.14187887833901 | bayes_pls_golite062009 |
| arginine-tRNA ligase activity | 1.13743634264647 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.06535308346284 | bayes_pls_golite062009 |
| cysteine-tRNA ligase activity | 0.844943947059557 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.625793556381714 | bayes_pls_golite062009 |
| binding | 0.47302762432927 | bayes_pls_golite062009 |
| nucleic acid binding | 0.161799496958314 | bayes_pls_golite062009 |
