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View Structure Prediction Details

Protein: CE17979
Organism: Caenorhabditis elegans
Length: 342 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE17979.

Description E-value Query
Range
Subject
Range
gi|39593389, gi|... - gi|39593389|emb|CAE64859.1| Hypothetical protein CBG09655 [Caenorhabditis briggsae], gi|187031657|em...
gi|157763212 - gi|157763212|ref|XP_001673948.1| Hypothetical protein CBG09655 [Caenorhabditis briggsae AF16]
232.0 [0..1] [342..1]

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Predicted Domain #1
Region A:
Residues: [1-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLALVLGIL ICTTSAWGQW RTNQRTHQLS LLPESSTLRL CRDFTNTTRF KEILAPIMVP  60
   61 RIVDTKQHRQ VGDYLQSFLH NLGFATEWDA FTDTTPLGTR NFRNLIATFD ESAPRRLVLA 120
  121 CHYDSKIIPG QVMIAATDSA VPCAMMLDIA QTLAPYMYKR VAQQIGLQLI FFDGEEAFRD 180
  181 WTATDSLYGS RHLAQKWEQK WYPSSSSLNN FELSKELDRI DVLMLLDLLG AANPSIGNTI 240
  241 GMGANDLFSQ LADVESNLRT SGCLSSLRRN VFNKQLSYNQ VEDDHIPFLK RGVPILHLIT 300
  301 VPFPSVWHRS SDNANALHYP TIDHMTAVIR VFVAKYLGIA PA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.39794
Match: 2afmA
Description: Crystal structure of human glutaminyl cyclase at pH 6.5
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
peptidase activity 3.33010352069253 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.96046345079997 bayes_pls_golite062009
hydrolase activity 2.61327242243519 bayes_pls_golite062009
exopeptidase activity 1.70361627875478 bayes_pls_golite062009
catalytic activity 1.3989281287879 bayes_pls_golite062009
metallopeptidase activity 1.34087538226325 bayes_pls_golite062009
carboxypeptidase activity 0.891655769761122 bayes_pls_golite062009
metalloexopeptidase activity 0.619120257877893 bayes_pls_golite062009
metallocarboxypeptidase activity 0.180859448845431 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle