| Protein: | pqn-51 |
| Organism: | Caenorhabditis elegans |
| Length: | 354 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pqn-51.
| Description | E-value | Query Range |
Subject Range |
|
|
266.0 | [0..1] | [354..1] |
|
Region A: Residues: [1-105] |
1 11 21 31 41 51
| | | | | |
1 MAHGNGIAEL YKSVMADVIA NMKEAFLDEN IDVDVLSQLR KEWEDKVNSS GCVDLESNAP 60
61 PPAPRQQHHV PPSAVRPNPM PPQRPVAQQP VRALSALHAA HIGDA
|
| Detection Method: |  |
| Confidence: | 4.21 |
| Match: | 1rm1C |
| Description: | Structure of a Yeast TFIIA/TBP/TATA-box DNA Complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [106-262] |
1 11 21 31 41 51
| | | | | |
1 PIRMAYTGQP TQHPSQVRMF NPQFQGGIHF QPGQVFVVQQ PNGQNIPMSI MPNQIPQHRI 60
61 IHQGQPQQAQ QQQPQQGNQL THMNQMDGNV GSESDGEGPS GPVKLAPKKT KCSLRVRGSG 120
121 ASEKKAMKVL GSLLKDFQLD GGGGGMSDSS SEDEPDD
|
| Detection Method: | |
| Confidence: | 7.0 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [263-354] |
1 11 21 31 41 51
| | | | | |
1 DDDPLRRIAD RMGNGEVEDG DQVAEEEPLN SEDDQSDDED LTMLFEADNV VMCQFEKVNR 60
61 ARTKWKFQLK DGIMHIDKKD YCFQKCTGEA EW
|
| Detection Method: | |
| Confidence: | 37.09691 |
| Match: | 1nvpC |
| Description: | HUMAN TFIIA/TBP/DNA COMPLEX |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA polymerase II transcription factor activity | 1.07041965857219 | bayes_pls_golite062009 |
| transcription regulator activity | 0.646609146750617 | bayes_pls_golite062009 |
| binding | 0.144827418964242 | bayes_pls_golite062009 |
