| Protein: | CE11898 |
| Organism: | Caenorhabditis elegans |
| Length: | 432 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE11898.
| Description | E-value | Query Range |
Subject Range |
|
|
303.0 | [0..17] | [429..66] |
|
Region A: Residues: [1-70] |
1 11 21 31 41 51
| | | | | |
1 MSDTTDVPEN QKSPKPSGKA DKRKIEEKPE NSSLKRKKFE DPNKKVDPLE ELPMKVPFKI 60
61 VDGVRHLAPY
|
| Detection Method: |  |
| Confidence: | 18.221849 |
| Match: | 2uu9D |
| Description: | No description for 2uu9D was found. |
|
Region A: Residues: [71-432] |
1 11 21 31 41 51
| | | | | |
1 WACYRTRTKG RWIGRKMVEV FSGEFLSTNR NYAKIACKMG RIYVNGEQMT DVDYVMRNGD 60
61 RVEHWAHRHE HPIRDLPIRV ISETDDLFVV EKPPSLPVHT CGQYAIHTVL GQLRVNEGRT 120
121 GLRVLHRLDR ATSGVLLFAK NYETDLEFKT TLKQGEWSKE YICKVDGVFP DEEQVCEQPI 180
181 GPLVISMGIQ CVRPDGKDAK SRFRKLWSDG TQSVVQVHIE TGRTHQIRVH SQFLGHPIAG 240
241 DQIYNSAVWG PTKGKNADYQ KSFDELCEDV RNTHKCENWH EKPNPEFEQR MEHLAADTTP 300
301 ITPEAPSLTL EQRPEFDEIC QKCNVESKKV PENHFQLYLH CLKYETKKWS FKTEMPDWAV 360
361 QK
|
| Detection Method: | |
| Confidence: | 76.69897 |
| Match: | 1qyuA |
| Description: | Structure of the catalytic domain of 23S rRNA pseudouridine synthase RluD |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| pseudouridine synthase activity | 5.19957135839682 | bayes_pls_golite062009 |
| intramolecular transferase activity | 3.78688422405974 | bayes_pls_golite062009 |
| isomerase activity | 2.91720316078381 | bayes_pls_golite062009 |
| catalytic activity | 2.02180970970004 | bayes_pls_golite062009 |
| transcription regulator activity | 1.21173188039059 | bayes_pls_golite062009 |
| binding | 1.17570507184058 | bayes_pls_golite062009 |
| DNA binding | 0.950713703876672 | bayes_pls_golite062009 |
| nucleic acid binding | 0.909704702595901 | bayes_pls_golite062009 |
| RNA binding | 0.706879359688019 | bayes_pls_golite062009 |
| protein binding | 0.260117304773608 | bayes_pls_golite062009 |
| transferase activity | 0.237728328252954 | bayes_pls_golite062009 |
