| Protein: | cir-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 560 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cir-1.
| Description | E-value | Query Range |
Subject Range |
|
|
232.0 | [0..16] | [557..694] |
|
Region A: Residues: [1-193] |
1 11 21 31 41 51
| | | | | |
1 MGKGFQNFMS KKDFHPSAFR NLKMVWEARQ KKSLEDKRQE ELRVAYEKEQ EILNNKALLG 60
61 DEKAKMGLSF MYDAPAGMTK REEPKEEPKF EWQRKYQAPR EDWAKGNEEI QDQPFGIQVR 120
121 NVRCCKCHKW GHINTDRECP LFGKSGNFED EGYANNPSDL IKDLRRRRQE GKAGPSTSKS 180
181 SAAAATGEDD DED
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [194-338] |
1 11 21 31 41 51
| | | | | |
1 EWMDHQQLAS DMREEHGIKL KSSVLAGMQT DQQLTRMKKE MTEEEMMLEF FNSMTEKEKK 60
61 KLHKKLMSGA DLEDVMKKKS KKEKKKEKKE KRKNKDKKKD KKKNKKSKSR ETDDDSDGSD 120
121 SEDDWKEKSS KRIKREVESS PEYRS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [339-560] |
1 11 21 31 41 51
| | | | | |
1 KYIKQEVLSE DENSHGRKDS SRKRAHNDSE SSNEVRSSER KRSRRDDSPN AKRSIGLKSP 60
61 ERRSSRDRKS SPKQRQDSPV RRRRSPSSIR KESQRVRKHS PEQKRNGRHD SRSVSPVRRR 120
121 RSPSPDNRQL GSRKQYSPLR RRQSSPMVAS PRRRRSPSPE RQRKRRSPSD SPPTRRLSTS 180
181 PIRRRRSPSP NKLPVRRRRH DSGSPDRDGS ESPKMWRKKS HK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
