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Protein Overview: cir-1

General Information:
Name(s) found: cir-1 / CE11194 [WormBase]
Description(s) found:
Found 23 descriptions.
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  • WBGene00018892 locus:cir-1 status:Confirmed UniProt:G5EBE3 protein_id:CCD71886.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 560 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: hermaphrodite genitalia development [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    gastrulation with mouth forming first [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKGFQNFMS KKDFHPSAFR NLKMVWEARQ KKSLEDKRQE ELRVAYEKEQ EILNNKALLG  60
   61 DEKAKMGLSF MYDAPAGMTK REEPKEEPKF EWQRKYQAPR EDWAKGNEEI QDQPFGIQVR 120
  121 NVRCCKCHKW GHINTDRECP LFGKSGNFED EGYANNPSDL IKDLRRRRQE GKAGPSTSKS 180
  181 SAAAATGEDD DEDEWMDHQQ LASDMREEHG IKLKSSVLAG MQTDQQLTRM KKEMTEEEMM 240
  241 LEFFNSMTEK EKKKLHKKLM SGADLEDVMK KKSKKEKKKE KKEKRKNKDK KKDKKKNKKS 300
  301 KSRETDDDSD GSDSEDDWKE KSSKRIKREV ESSPEYRSKY IKQEVLSEDE NSHGRKDSSR 360
  361 KRAHNDSESS NEVRSSERKR SRRDDSPNAK RSIGLKSPER RSSRDRKSSP KQRQDSPVRR 420
  421 RRSPSSIRKE SQRVRKHSPE QKRNGRHDSR SVSPVRRRRS PSPDNRQLGS RKQYSPLRRR 480
  481 QSSPMVASPR RRRSPSPERQ RKRRSPSDSP PTRRLSTSPI RRRRSPSPNK LPVRRRRHDS 540
  541 GSPDRDGSES PKMWRKKSHK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..193] MSA 2.188995 View MSA. No confident structure predictions are available.
    2 View Details [194..338] deduced N/A No confident structure predictions are available.
    3 View Details [339..560] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle