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View Structure Prediction Details

Protein: CE10298
Organism: Caenorhabditis elegans
Length: 464 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE10298.

Description E-value Query
Range
Subject
Range
gi|48895332, gi|... - gi|71675283|ref|ZP_00673028.1| Aminotransferase, class I and II [Trichodesmium erythraeum IMS101], g...
356.0 [0..45] [439..1]

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Predicted Domain #1
Region A:
Residues: [1-464]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTLMSHSRI TPLPGAITKE EIKNQLLVHE RRFLSKPNRK DQWNVLPQSA HSKNTVNPVR  60
   61 KIADACAVPP HPEKKVIKLH LGDPSVGGKL PPSEIAVQAM HESVSSHMFD GYGPAVGALA 120
  121 AREAIVERYS SADNVFTADD VVLASGCSHA LQMAIEAVAN AGENILVPHP GFPLYSTLCR 180
  181 PHNIVDKPYK IDMTGEDVRI DLSYMATIID DNTKAIIVNN PGNPTGGVFT KEHLEEILAF 240
  241 AHQYKLIIIA DEIYGDLVYN GATFYPLASL SPKVPIITCD GIAKRWMVPG WRLGWLIIHN 300
  301 HFGVLTDVKN GIVALSQKIV GPCSLVQGAL PKILRETPED YFVYTRNVIE TNANIVDSIL 360
  361 ADVPGMRVVK PKGAMYMMVN ISRTAYGSDV SFCQNLIREE SVFCLPGQAF SAPGYFRVVL 420
  421 TCGSEDMEEA ALRIREFCYR NFNQHSDSED SSDEGLDLSA MESD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.221849
Match: 1xi9A
Description: Alanine aminotransferase from Pyrococcus furiosus Pfu-1397077-001
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
L-aspartate:2-oxoglutarate aminotransferase activity 5.51961002550688 bayes_pls_golite062009
catalytic activity 2.29878871754893 bayes_pls_golite062009
4-aminobutyrate transaminase activity 1.82501790383768 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor 1.63055151623667 bayes_pls_golite062009
glycine dehydrogenase (decarboxylating) activity 1.63055151623667 bayes_pls_golite062009
transferase activity 1.44093490824786 bayes_pls_golite062009
transferase activity, transferring nitrogenous groups 1.28316822767388 bayes_pls_golite062009
transaminase activity 1.24990480711889 bayes_pls_golite062009
hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances 0.942545094747784 bayes_pls_golite062009
hydrolase activity, acting on acid carbon-carbon bonds 0.845816961387768 bayes_pls_golite062009
binding 0.536634592992536 bayes_pls_golite062009
transferase activity, transferring acyl groups 0.319452731970428 bayes_pls_golite062009
pyridoxal phosphate binding 0.16957228630576 bayes_pls_golite062009
vitamin B6 binding 0.16957228630576 bayes_pls_golite062009
aromatic-amino-acid:2-oxoglutarate aminotransferase activity 0.0916183433120769 bayes_pls_golite062009
kynureninase activity 0.0900983660305177 bayes_pls_golite062009
cystathionine beta-lyase activity 0.0833010353195099 bayes_pls_golite062009
nucleic acid binding 0.013097682076602 bayes_pls_golite062009

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