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View Structure Prediction Details

Protein: CE09738
Organism: Caenorhabditis elegans
Length: 389 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE09738.

Description E-value Query
Range
Subject
Range
gi|134024818, gi... - gi|76657550|ref|XP_596391.2| PREDICTED: similar to pregnancy-associated glycoprotein-16 [Bos taurus]...
357.0 [0..1] [388..1]

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Predicted Domain #1
Region A:
Residues: [1-389]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIISIIFLL IGSSTAAVLE HQLIWKESRM IEMIRNGEYP AYLEYRDRMV ASRSSNLATV  60
   61 VQSTTDYVYY EYMGNITVGT PDQNFIVVLD TGSANLLIPG TNCTTYCEKK RLFNEKASST 120
  121 YIATNRPWQI KYASGDAYGT LGIDTVKIGG SGEAQLAIPR SYLGVADTVG SDFKWSPKEG 180
  181 IFGLAFTALA VDNITPPIIN AINQGLLDQP LFTTWFGQRG APGTSASGAF TYGGLDKNHC 240
  241 GPVIGYAELT NARHFQFQAT GFSLGSYVST TTYEVITDTA TSFLCGPQAA IDNLAKAAGA 300
  301 TWDPTNQVFN IPCDADAGPI KMKIGQFNYV IRANNYILKI DTNSCLFAAI PQNYAGFGPS 360
  361 WILGGPFMRQ YCNVHDIGQK RVGFCLSLA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 85.0
Match: 2psgA
Description: REFINED STRUCTURE OF PORCINE PEPSINOGEN AT 1.8 ANGSTROMS RESOLUTION
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
aspartic-type endopeptidase activity 7.9145950161796 bayes_pls_golite062009
aspartic-type peptidase activity 7.9145950161796 bayes_pls_golite062009
peptidase activity 5.78181196721293 bayes_pls_golite062009
endopeptidase activity 5.4888481808613 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 5.39972232367526 bayes_pls_golite062009
hydrolase activity 4.34796304893506 bayes_pls_golite062009
catalytic activity 1.54514410489082 bayes_pls_golite062009
binding 1.10054369202721 bayes_pls_golite062009
receptor binding 0.561225023505917 bayes_pls_golite062009
protein binding 0.193907750061394 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle