| Protein: | hil-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 232 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hil-1.
| Description | E-value | Query Range |
Subject Range |
|
|
133.0 | [0..31] | [232..428] |
|
|
120.0 | [0..31] | [232..427] |
|
|
111.0 | [0..31] | [212..433] |
|
|
110.0 | [0..31] | [212..322] |
|
Region A: Residues: [1-115] |
1 11 21 31 41 51
| | | | | |
1 MTTSLIHMAN HLDASTEEIS LNYVLLGHPH HERAQHHPSY MDMIKGAIQA IDNGTGSSKA 60
61 AILKYIAQNY HVGENLPKVN NHLRSVLKKA VDSGDIEQTR GHGATGSFRM GKECE
|
| Detection Method: |  |
| Confidence: | 8.522879 |
| Match: | 1hstA |
| Description: | Histone H5, globular domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.70447500820585 | bayes_pls_golite062009 |
| transcription regulator activity | 1.25012693805862 | bayes_pls_golite062009 |
| DNA binding | 1.08156536381633 | bayes_pls_golite062009 |
| nucleic acid binding | 0.921895790886353 | bayes_pls_golite062009 |
| transcription factor activity | 0.609796449876546 | bayes_pls_golite062009 |
| protein binding | 0.0158939338009019 | bayes_pls_golite062009 |
|
Region A: Residues: [116-232] |
1 11 21 31 41 51
| | | | | |
1 KNLQVGIPVQ TKPMLMLKEV RQKLENISKA EKTKPSTSSM STNKKGKPIS TMKKRGVMSK 60
61 KRSSKNKMAP KAKSHGLKKK GPATKSSGLV HKAAGAKNEA APTTKMELRT GTRKSYC
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
