YRC Public Data Repository - Protein Structure Prediction

Protein:	CE07700
Organism:	Caenorhabditis elegans
Length:	278 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE07700.

Description	E-value	Query Range	Subject Range
gi\|187034302, gi... - gi\|39593028\|emb\|CAE62642.1\| Hypothetical protein CBG06776 [Caenorhabditis briggsae], gi\|187034302\|em...	218.0	[0..1]	[278..1]
gi\|20807038 - gi\|20807038\|ref\|NP_622209.1\| Acetyltransferase [Thermoanaerobacter tengcongensis MB4] gi\|20807038, gi\|... - gi\|20807038\|ref\|NP_622209.1\| acetyltransferase [Thermoanaerobacter tengcongensis MB4], gi\|20515525\|g...	136.0	[0..90]	[243..1]
gi\|14521872, gi\|... - gi\|5459092\|emb\|CAB50578.1\| N-terminal acetyltransferase [Pyrococcus abyssi GE5], gi\|14521872\|ref\|NP_... gi\|5459092, gi\|7... - pir\|\|D75017 n-terminal acetyltransferase PAB1098 - Pyrococcus abyssi (strain Orsay), gi\|5459092\|emb...	134.0	[0..83]	[251..10]
gi\|14590218, gi\|... - gi\|3256685\|dbj\|BAA29368.1\| 172aa long hypothetical acetyltransferase [Pyrococcus horikoshii OT3], gi... gi\|7451125 - pir\|\|A71455 probable acetyltransferase - Pyrococcus horikoshii	134.0	[0..77]	[254..4]
gi\|18976639, gi\|... - gi\|18976639\|ref\|NP_577996.1\| ribosomal protein s18 alanine acetyltransferase [Pyrococcus furiosus DS...	132.0	[0..89]	[254..14]
gi\|167039151, gi... - gi\|167039151\|ref\|YP_001662136.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp.... gi\|76797381, gi\|... - gi\|76797381\|ref\|ZP_00779704.1\| Ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter ethan... gi\|241884906, gi... - gi\|241902652\|ref\|ZP_04787384.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter broc... gi\|242230040, gi... - gi\|242258437\|ref\|ZP_04803241.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp. ...	129.0	[0..92]	[243..2]
gi\|21227395, gi\|... - gi\|21227395\|ref\|NP_633317.1\| acetyltransferase [Methanosarcina mazei Go1], gi\|20905758\|gb\|AAM30989.1...	129.0	[0..95]	[272..2]
gi\|51593357 - gi\|51593357\|gb\|AAH80651.1\| ARD1B protein [Homo sapiens]	129.0	[0..49]	[254..8]
gi\|72395656, gi\|... - gi\|73668494\|ref\|YP_304509.1\| SSU ribosomal protein S18P alanine acetyltransferase [Methanosarcina ba...	129.0	[0..95]	[271..2]

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Predicted Domain #1

Region A:
Residues: [1-278]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIGVQKKTS TPLDVGTEQE PTNLEKTIGT LRRCLQIAGT SNKPGSRSAK NSISEESNDL  60
   61 TMEESVPEAS KWPHCQHMIS QDEAPRNDEL ASPNIRIVAY KDESQINDIM RLITKDLSEP 120
  121 YSIYTYRYFL HNWPEYCFLA YDQTNNTYIG AVLCKLELDM YGRCKGYLAM LAVDESCRRL 180
  181 GIGTRLVRRA LDAMQSKGCD EIVLETEVSN KNAQRLYSNL GFIRQKRLLK YYLNGGDAFR 240
  241 LKLIFTSRRV RSLNNQENYQ PRCRVNEDDT PDEEEGTY

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	16.30103
Match:	1ozpA
Description:	Crystal Structure of Rv0819 from Mycobacterium tuberculosis MshD-Mycothiol Synthase Acetyl-Coenzyme A Complex.
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
N-acetyltransferase activity	6.09290029352595	bayes_pls_golite062009
N-acyltransferase activity	6.08913516066746	bayes_pls_golite062009
acetyltransferase activity	5.86411968036951	bayes_pls_golite062009
histone acetyltransferase activity	5.85159161781386	bayes_pls_golite062009
lysine N-acetyltransferase activity	5.85159161781386	bayes_pls_golite062009
acyltransferase activity	4.72881921515185	bayes_pls_golite062009
transferase activity, transferring acyl groups	4.70793039001114	bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups	4.69837915971204	bayes_pls_golite062009
transferase activity	3.5778020729894	bayes_pls_golite062009
myristoyltransferase activity	3.50779447340192	bayes_pls_golite062009
glycylpeptide N-tetradecanoyltransferase activity	3.50779447340192	bayes_pls_golite062009
	3.29707445389818	bayes_pls_golite062009
catalytic activity	1.97933499002461	bayes_pls_golite062009
binding	0.632534855891142	bayes_pls_golite062009
nucleic acid binding	0.522132859536345	bayes_pls_golite062009
transcription regulator activity	0.0766125702622449	bayes_pls_golite062009
protein binding	0.0596470189462109	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: