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View Structure Prediction Details

Protein: wapl-1
Organism: Caenorhabditis elegans
Length: 746 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for wapl-1.

Description E-value Query
Range
Subject
Range
wapl-1 - status:Partially_confirmed UniProt:Q95ZR0 protein_id:AAK82910.1
750.0 [0..1] [746..1]

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Predicted Domain #1
Region A:
Residues: [1-207]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSDANSDDP FSKPIVRKRF QATLAQQGIE DDQLPSVRSS DSPDVPDTPD VPVNQLSSPP  60
   61 LSLPETLSEG NAETNLSDDS EPEMLSQSST SSLNRRMEDS AIDPSRGTRK SQSRGFDYDP 120
  121 AGERTTAPVQ KKKKDEIDMG GAKFFPKQEK KHVYTHKWTT EEDDEDEKTI SSSSNRYSSR 180
  181 PNQPAVSARP RQPVYATTST YSKPLAS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [208-746]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GYGSRVRHIK EANELRESGE YDDFKQDLVY ILSSLQSSDA SMKVKCLSAI SLAKKCVSPD  60
   61 FRQFIKSENM TKSIVKALMD SPEDDLFALA ASTVLYLLTR DFNSIKIDFP SLRLVSQLLR 120
  121 IEKFEQRPED KDKVVNMVWE VFNSYIEKQE VGGQKVSFDM RKESLTPSSL IIEALVFICS 180
  181 RSVNDDNLKS ELLNLGILQF VVAKIETNVN LIADNADDTY SILILNRCFR ILESSSVFHK 240
  241 KNQAFLISHR SNILISSLAK FLQVILDRVH QLAEEEVKKY ISCLALMCRL LINISHDNEL 300
  301 CCSKLGQIEG FLPNAITTFT YLAPKFGKEN SYDINVMMTS LLTNLVERCN ANRKVLIAQT 360
  361 VKMVIPGHDV EEVPALEAIT RLFVYHESQA QIVDADLDRE LAFDEGGCGD EEEEEEGGDE 420
  421 SSDEDGVRKD GRLDRNKMDR MDQVDVVHAL QQVMNKASAH MEGSVIASYH ALLVGFVLQQ 480
  481 NEDHLDEVRK HLPGKNFQNM ISQLKRLYDF TKATMAKRVE SNSGFRAIER VIEYLERLE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.04
Match: 2gl7A
Description: No description for 2gl7A was found.

Predicted functions:

Term Confidence Notes
binding 1.4227425773296 bayes_pls_golite062009
protein binding 0.79300810988911 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle