| Protein: | pccb-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 536 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pccb-1.
| Description | E-value | Query Range |
Subject Range |
|
|
609.0 | [0..30] | [536..1] |
|
Region A: Residues: [1-536] |
1 11 21 31 41 51
| | | | | |
1 MLSRFARQLA LPVFNGVLHP TRATSSIAHT IKVAHKIDET REKALLGGGK KRVDAQHARG 60
61 KLTARERIDL LLDRNTFREY DMFAEHTCND FGMQKEKYPG DSVVTGRGEI NGRTVFVFSQ 120
121 DFTVFGGSLS SIHAKKIVKI MREAMLVGAP VIGLNDSGGA RIQEGVESLA GYADIFQENV 180
181 MASGVVPQIS MIMGPCAGGA VYSPALTDFT FMVRDTSYLF ITGPDVVKAV TNEEVTQEEL 240
241 GGAKTHTVTS GVAHGAFDND VDALMSLREL FNYLPLSNTD AAPIRAAEDP WDRAVPSLDT 300
301 VVPLESTAAY NMKDVVHALV DEGDFFEIMP DYAKNLVIGF ARMNGRTVGI VGNNPKFAAG 360
361 CLDINSSVKG ARFVRFCDAF NIPIITLVDV PGFLPGTAQE YGGIIRHGAK LLYAFAEATV 420
421 PKITIITRKA FGGAYDVMSS KHLRGDINYA WPTAEVAVMG AKGAVSILFR NDKEHAVQHE 480
481 EEYTELFSNP FPAAVRGFVD DIIIPSETRK KVCEDLNMLE SKKLKNPWKK HGNIPL
|
| Detection Method: |  |
| Confidence: | 166.0 |
| Match: | 1vrgA |
| Description: | Crystal structure of propionyl-CoA carboxylase, beta subunit (TM0716) from THERMOTOGA MARITIMA at 2.30 A resolution |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| CoA carboxylase activity | 4.38629333084302 | bayes_pls_golite062009 |
| acetyl-CoA carboxylase activity | 4.36332808516753 | bayes_pls_golite062009 |
| ligase activity, forming carbon-carbon bonds | 4.29345455730254 | bayes_pls_golite062009 |
| enoyl-CoA hydratase activity | 3.92947460544831 | bayes_pls_golite062009 |
| methylcrotonoyl-CoA carboxylase activity | 2.85169024122548 | bayes_pls_golite062009 |
| 3-hydroxyacyl-CoA dehydrogenase activity | 2.44182589784656 | bayes_pls_golite062009 |
| dodecenoyl-CoA delta-isomerase activity | 1.80820904754223 | bayes_pls_golite062009 |
| catalytic activity | 1.46154163027498 | bayes_pls_golite062009 |
| propionyl-CoA carboxylase activity | 1.20853698666984 | bayes_pls_golite062009 |
| ligase activity | 0.98581896521131 | bayes_pls_golite062009 |
| binding | 0.578223105269736 | bayes_pls_golite062009 |
| 3-hydroxybutyryl-CoA epimerase activity | 0.241955774397835 | bayes_pls_golite062009 |
| racemase and epimerase activity, acting on hydroxy acids and derivatives | 0.099208209617217 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity, transposing C=C bonds | 0.0918189681606029 | bayes_pls_golite062009 |
