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View Structure Prediction Details

Protein: CE06112
Organism: Caenorhabditis elegans
Length: 301 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE06112.

Description E-value Query
Range
Subject
Range
gi|118403930, gi... - gi|118403930|ref|NP_001072181.1| 3-alpha-hydroxysteroid dehydrogenase [Xenopus (Silurana) tropicalis...
324.0 [0..1] [300..1]

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Predicted Domain #1
Region A:
Residues: [1-301]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVFTNVVGG AFKFSDGYEM PKIGLGISRI ETQQDLDVSI EAALKSGYRQ FDTANLYKNE  60
   61 TFLGNSLKKY LPQFGLTRED VFITTKVRTL NENTVEETEK QLANSLATLQ TDYVDLLLIH 120
  121 YPRDRDTGND DDYEINKSRR KIVWQTLEKA KESGRVRSIG VSNYEVYHLV EMFEYAKIRP 180
  181 VLNQYEYQPY LTRPTLKKFC DLNNIVVQSY SSLCWGDKEI LQEKPLVDLC QKYNQTPQAI 240
  241 LYAFAHCSNT SMIPKSATPS RIHDNLHNTI KIKLTEDELK SLRSLDKGKS FPQIGQTWRC 300
  301 L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.39794
Match: 1xjbA
Description: Crystal structure of human type 3 3alpha-hydroxysteroid dehydrogenase in complex with NADP(H), citrate and acetate molecules
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
aldehyde reductase activity 5.07106269693426 bayes_pls_golite062009
L-glucuronate reductase activity 4.06568552614053 bayes_pls_golite062009
arabinose reductase activity 3.28910924444005 bayes_pls_golite062009
xylose reductase activity 3.28910924444005 bayes_pls_golite062009
glucose 1-dehydrogenase (NADP+) activity 2.68048267823456 bayes_pls_golite062009
aldo-keto reductase activity 2.57303336304449 bayes_pls_golite062009
trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity 2.43245618396666 bayes_pls_golite062009
3-alpha-hydroxysteroid dehydrogenase (B-specific) activity 2.43245618396666 bayes_pls_golite062009
alpha-keto ester reductase activity 2.31616201247794 bayes_pls_golite062009
alpha-keto amide reductase activity 2.31616201247794 bayes_pls_golite062009
steroid dehydrogenase activity 2.19555484888528 bayes_pls_golite062009
steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 1.87468990921314 bayes_pls_golite062009
catalytic activity 1.68179794468736 bayes_pls_golite062009
glucose 1-dehydrogenase activity 1.55697325009049 bayes_pls_golite062009
bile acid transmembrane transporter activity 1.47447940903315 bayes_pls_golite062009
monocarboxylic acid transmembrane transporter activity 1.45034485133104 bayes_pls_golite062009
binding 1.3044513338497 bayes_pls_golite062009
bile acid binding 1.28757511368757 bayes_pls_golite062009
transporter activity 1.24767072239634 bayes_pls_golite062009
oxidoreductase activity 1.22645031212774 bayes_pls_golite062009
organic acid transmembrane transporter activity 1.20678148401125 bayes_pls_golite062009
carboxylic acid transmembrane transporter activity 1.19919645230426 bayes_pls_golite062009
steroid dehydrogenase activity, acting on the CH-CH group of donors 1.15597377782029 bayes_pls_golite062009
3-oxo-5-beta-steroid 4-dehydrogenase activity 1.15597377782029 bayes_pls_golite062009
protein binding 1.06359558718341 bayes_pls_golite062009
transmembrane transporter activity 1.03420335553507 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 0.868027162240181 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 0.86591084281532 bayes_pls_golite062009
substrate-specific transporter activity 0.783004917746429 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.544360068128604 bayes_pls_golite062009
ion transmembrane transporter activity 0.260605752589411 bayes_pls_golite062009
cation transmembrane transporter activity 0.0547047948210824 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle